[med-svn] [express] 01/01: remove extraneous reference; add third pub

[Michael Crusoe]

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misterc-guest pushed a commit to branch master
in repository express.

commit 57a3522610afaa0c7a855b62bd172c95e3c94f5e
Author: Michael R. Crusoe <mcrusoe at msu.edu>
Date:   Mon Feb 16 00:22:21 2015 -0500

    remove extraneous reference; add third pub
---
 debian/upstream/metadata | 40 +++++++---------------------------------
 1 file changed, 7 insertions(+), 33 deletions(-)

diff --git a/debian/upstream/metadata b/debian/upstream/metadata
index 8d7f565..32b5248 100644
--- a/debian/upstream/metadata
+++ b/debian/upstream/metadata
@@ -9,39 +9,6 @@ Reference:
    DOI: 10.1038/nmeth.2251
    PMID: 23160280
    URL: http://www.nature.com/nmeth/journal/v10/n1/full/nmeth.2251.html
- - Author: Olivier Cappé and Eric Moulines
-   Title: On-line expectation–maximization algorithm for latent data models
-   Year: 2009)
-   Journal: Journal of the Royal Statistical Society
-   Volume: 71
-   Pages: 593–613
-   DOI: 10.1111/j.1467-9868.2009.00698.x
-   URL: http://onlinelibrary.wiley.com/doi/10.1111/j.1467-9868.2009.00698.x/abstract
- - Author:  Adam Roberts and Lior Pachter
-   Title: Streaming fragment assignment for real-time analysis of sequencing experiments
-   Journal: Nature Methods
-   Year: 2013
-   Volume: 10
-   Number: 1
-   Pages: 71–73
-   DOI: 10.1038/nmeth.2251
-   PMID: 23160280
-   URL: http://www.nature.com/nmeth/journal/v10/n1/full/nmeth.2251.html
- - Author: Cole Trapnell and Brian A Williams and Geo Pertea and Ali Mortazavi and Gordon Kwan and Marijke J van Baren and Steven L Salzberg and Barbara J Wold and Lior Pachter
-   Title: Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
-   Journal: Nature Biotechnology
-   Year: 2010
-   Volume: 28
-   Number: 5
-   Pages: 511–515
-   DOI: 10.1038/nbt.1621
-   PMID: 20436464
-   URL: http://www.nature.com/nbt/journal/v28/n5/full/nbt.1621.html
- - Author: Lior Pachter
-   Title: Models for transcript quantification from RNA-Seq
-   Cite-As: arXiv:1104.3889 [q-bio.GN]
-   URL: http://arxiv.org/abs/1104.3889
-   eprint: http://arxiv.org/pdf/1104.3889v2.pdf
  - Author:  Adam Roberts and Cole Trapnell and Julie Donaghey and John L Rinn and Lior Pachter
    Title: Improving RNA-Seq expression estimates by correcting for fragment bias
    Journal: Genome Biology
@@ -53,3 +20,10 @@ Reference:
    PMID: 21410973
    URL: http://genomebiology.com/2011/12/3/R22
    eprint: http://genomebiology.com/content/pdf/gb-2011-12-3-r22.pdf
+ - Author: Roberts, Adam
+   Title: Ambiguous fragment assignment for high-throughput sequencing experiments
+   School: 'EECS Department, University of California, Berkeley'
+   Year: 2013
+   Month: Oct
+   URL: http://www.eecs.berkeley.edu/Pubs/TechRpts/2013/EECS-2013-177.html
+   Number: UCB/EECS-2013-177

-- 
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