[med-svn] [transdecoder] 01/02: Formatting

[Andreas Tille]

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tille pushed a commit to branch master
in repository transdecoder.

commit f36c3d8b3dd355c908fc16ca2ab8f12cc285066a
Author: Andreas Tille <tille at debian.org>
Date:   Mon Feb 16 16:34:17 2015 +0100

    Formatting
---
 debian/control | 25 ++++++++++---------------
 1 file changed, 10 insertions(+), 15 deletions(-)

diff --git a/debian/control b/debian/control
index 226a3ed..fb69854 100644
--- a/debian/control
+++ b/debian/control
@@ -23,18 +23,13 @@ Description: find coding regions within transcripts
  .
  TransDecoder identifies likely coding sequences based on the following
  criteria:
- .
- a minimum length open reading frame (ORF) is found in a transcript sequence
- .
- a log-likelihood score similar to what is computed by the GeneID software is
- > 0.
- .
- the above coding score is greatest when the ORF is scored in the 1st reading
- frame as compared to scores in the other 5 reading frames.
- .
- if a candidate ORF is found fully encapsulated by the coordinates of another
- candidate ORF, the longer one is reported. However, a single transcript can
- report multiple ORFs (allowing for operons, chimeras, etc).
- .
- optional the putative peptide has a match to a Pfam domain above the noise
- cutoff score.
+  * a minimum length open reading frame (ORF) is found in a transcript sequence
+  * a log-likelihood score similar to what is computed by the GeneID software
+    is > 0.
+  * the above coding score is greatest when the ORF is scored in the 1st
+    reading frame as compared to scores in the other 5 reading frames.
+  * if a candidate ORF is found fully encapsulated by the coordinates of
+    another candidate ORF, the longer one is reported. However, a single
+    transcript can report multiple ORFs (allowing for operons, chimeras, etc).
+  * optional the putative peptide has a match to a Pfam domain above the noise
+    cutoff score.

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