[med-svn] [itksnap] branch master updated (af35b22 -> 51ca91c)
Gert Wollny
gert-guest at moszumanska.debian.org
Wed Jan 14 15:57:18 UTC 2015
This is an automated email from the git hooks/post-receive script.
gert-guest pushed a change to branch master
in repository itksnap.
from af35b22 Move debian/upstream to debian/upstream/metadata
new 526cf29 Imported Upstream version 3.2.0
new a108041 update .gitignore resolving conflicts
new aecff42 start packaging new upstream
new 84af9a3 correct control file
new 3ae6758 correct control file
new f189a37 d/control: no comments in depends section allowed
new 01bf19c d/rules: correct typo in configure option
new 010b8b5 d/rules: add flags differently
new 3a839e4 d/rules: add flags differently
new 7eefddc disable running tests for now
new 679d74a enable parallel build
new c79659f update rules for pixmap creation
new b5df2cb correct control to clean some lintian warnings and update changelog
new d9a599d add a few optimization flags
new 51ca91c add some optimization flags that make a notable difference when segmenting manually
The 15 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.gitignore | 17 +-
CMake/CustomBuildSettings.cmake | 38 -
CMake/DeployQt5.cmake | 339 +
CMake/find_fltk_13.cmake | 158 -
CMake/rpavlik/GetGitRevisionDescription.cmake | 130 +
CMake/rpavlik/GetGitRevisionDescription.cmake.in | 38 +
CMake/standalone.cmake | 57 +-
CMakeLists.txt | 1303 ++--
CTestConfig.cmake | 6 +-
Common/AbstractModel.cxx | 130 +
Common/AbstractModel.h | 111 +
Common/AbstractPropertyContainerModel.cxx | 86 +
Common/AbstractPropertyContainerModel.h | 360 +
Common/CommandLineArgumentParser.cxx | 21 +-
Common/CommandLineArgumentParser.h | 11 +
Common/EventBucket.cxx | 80 +
Common/EventBucket.h | 75 +
Common/GPUSettings.h.in | 2 +
Common/HistoryManager.cxx | 133 +
Common/HistoryManager.h | 136 +
Common/IPCHandler.cxx | 218 +
Common/IPCHandler.h | 83 +
Common/IRISException.cxx | 31 +-
Common/IRISException.h | 32 +-
Common/IRISVectorTypes.h | 62 +-
Common/ITKExtras/itkVoxBoCUBImageIO.cxx | 42 +-
Common/PresetManager.h | 111 +
Common/PresetManager.hxx | 151 +
Common/PropertyModel.h | 1188 ++++
Common/Rebroadcaster.cxx | 231 +
Common/Rebroadcaster.h | 116 +
Common/Registry.cxx | 329 +-
Common/Registry.h | 89 +-
Common/SNAPCommon.cxx.in | 19 +
Common/SNAPCommon.h | 196 +-
Common/SNAPEventListenerCallbacks.h | 77 +
Common/SNAPEvents.h | 180 +
Common/SNAPOpenGL.cxx | 39 +
Common/SNAPOpenGL.h | 25 +-
Common/SystemInterface.cxx | 853 +--
Common/SystemInterface.h | 129 +-
Common/ThreadSpecificData.cxx | 115 +
Common/ThreadSpecificData.h | 76 +
{UserInterface/Window3D => Common}/Trackball.cxx | 0
Common/Trackball.h | 129 +
Documentation/DesignNotes/gui_design.txt | 56 +
Documentation/Shortcuts/Shortcuts_SNAP3.pages | Bin 0 -> 110336 bytes
Documentation/Shortcuts/Shortcuts_SNAP3.pdf | Bin 0 -> 50039 bytes
GUI/Model/AbstractLayerAssociatedModel.h | 258 +
GUI/Model/AbstractLayerInfoItemSetDomain.h | 62 +
GUI/Model/CollectionModel.cxx | 5 +
GUI/Model/CollectionModel.h | 210 +
GUI/Model/ColorLabelPropertyModel.cxx | 143 +
GUI/Model/ColorLabelPropertyModel.h | 117 +
GUI/Model/ColorLabelQuickListModel.cxx | 131 +
GUI/Model/ColorLabelQuickListModel.h | 59 +
GUI/Model/ColorMapModel.cxx | 661 ++
GUI/Model/ColorMapModel.h | 234 +
GUI/Model/CursorInspectionModel.cxx | 162 +
GUI/Model/CursorInspectionModel.h | 99 +
GUI/Model/DisplayLayoutModel.cxx | 215 +
GUI/Model/DisplayLayoutModel.h | 113 +
GUI/Model/Generic3DModel.cxx | 453 ++
GUI/Model/Generic3DModel.h | 173 +
GUI/Model/GenericSliceModel.cxx | 598 ++
GUI/Model/GenericSliceModel.h | 343 +
GUI/Model/GlobalPreferencesModel.cxx | 203 +
GUI/Model/GlobalPreferencesModel.h | 134 +
GUI/Model/GlobalUIModel.cxx | 873 +++
GUI/Model/GlobalUIModel.h | 428 ++
GUI/Model/ImageIOWizardModel.cxx | 405 ++
GUI/Model/ImageIOWizardModel.h | 229 +
GUI/Model/ImageInfoModel.cxx | 204 +
GUI/Model/ImageInfoModel.h | 97 +
GUI/Model/IntensityCurveModel.cxx | 748 +++
GUI/Model/IntensityCurveModel.h | 242 +
GUI/Model/LabelEditorModel.cxx | 374 ++
GUI/Model/LabelEditorModel.h | 126 +
GUI/Model/LayerGeneralPropertiesModel.cxx | 357 +
GUI/Model/LayerGeneralPropertiesModel.h | 142 +
GUI/Model/LayerSelectionModel.cxx | 22 +
GUI/Model/LayerSelectionModel.h | 54 +
GUI/Model/LayerTableRowModel.cxx | 371 ++
GUI/Model/LayerTableRowModel.h | 175 +
GUI/Model/MeshExportModel.cxx | 179 +
GUI/Model/MeshExportModel.h | 105 +
GUI/Model/NumericPropertyToggleAdaptor.h | 122 +
GUI/Model/OrthogonalSliceCursorNavigationModel.cxx | 185 +
GUI/Model/OrthogonalSliceCursorNavigationModel.h | 93 +
GUI/Model/PaintbrushModel.cxx | 490 ++
GUI/Model/PaintbrushModel.h | 69 +
GUI/Model/PaintbrushSettingsModel.cxx | 136 +
GUI/Model/PaintbrushSettingsModel.h | 65 +
GUI/Model/PolygonDrawingModel.cxx | 862 +++
GUI/Model/PolygonDrawingModel.h | 192 +
GUI/Model/RandomAccessCollectionModel.cxx | 2 +
GUI/Model/RandomAccessCollectionModel.h | 242 +
GUI/Model/RegistryEntryPropertyModel.h | 75 +
GUI/Model/ReorientImageModel.cxx | 332 +
GUI/Model/ReorientImageModel.h | 145 +
GUI/Model/SNAPUIFlag.h | 79 +
GUI/Model/SNAPUIFlag.txx | 0
GUI/Model/SaveModifiedLayersModel.cxx | 301 +
GUI/Model/SaveModifiedLayersModel.h | 207 +
GUI/Model/SliceWindowCoordinator.cxx | 471 ++
GUI/Model/SliceWindowCoordinator.h | 188 +
GUI/Model/SnakeParameterModel.cxx | 379 ++
GUI/Model/SnakeParameterModel.h | 126 +
GUI/Model/SnakeROIModel.cxx | 299 +
GUI/Model/SnakeROIModel.h | 141 +
GUI/Model/SnakeROIResampleModel.cxx | 256 +
GUI/Model/SnakeROIResampleModel.h | 100 +
GUI/Model/SnakeWizardModel.cxx | 1579 +++++
GUI/Model/SnakeWizardModel.h | 446 ++
GUI/Model/StateManagement.cxx | 79 +
GUI/Model/StateManagement.h | 134 +
GUI/Model/SynchronizationModel.cxx | 221 +
GUI/Model/SynchronizationModel.h | 60 +
GUI/Model/UIAction.cxx | 9 +
GUI/Model/UIAction.h | 51 +
GUI/Model/UIReporterDelegates.cxx | 5 +
GUI/Model/UIReporterDelegates.h | 90 +
GUI/Model/UIState.h | 22 +
GUI/Qt/Components/.DS_Store | Bin 0 -> 6148 bytes
GUI/Qt/Components/CollapsableGroupBox.cxx | 35 +
GUI/Qt/Components/CollapsableGroupBox.h | 31 +
GUI/Qt/Components/CollapsableGroupBox.ui | 102 +
GUI/Qt/Components/ColorLabelQuickListWidget.cxx | 124 +
GUI/Qt/Components/ColorLabelQuickListWidget.h | 57 +
GUI/Qt/Components/ColorMapInspector.cxx | 180 +
GUI/Qt/Components/ColorMapInspector.h | 61 +
GUI/Qt/Components/ColorMapInspector.ui | 602 ++
GUI/Qt/Components/ContrastInspector.cxx | 103 +
GUI/Qt/Components/ContrastInspector.h | 51 +
GUI/Qt/Components/ContrastInspector.ui | 721 ++
GUI/Qt/Components/CursorInspector.cxx | 163 +
GUI/Qt/Components/CursorInspector.h | 47 +
GUI/Qt/Components/CursorInspector.ui | 348 +
GUI/Qt/Components/DisplayLayoutInspector.cxx | 35 +
GUI/Qt/Components/DisplayLayoutInspector.h | 28 +
GUI/Qt/Components/DisplayLayoutInspector.ui | 339 +
GUI/Qt/Components/FileChooserPanelWithHistory.cxx | 631 ++
GUI/Qt/Components/FileChooserPanelWithHistory.h | 125 +
GUI/Qt/Components/FileChooserPanelWithHistory.ui | 224 +
GUI/Qt/Components/GeneralLayerInspector.cxx | 55 +
GUI/Qt/Components/GeneralLayerInspector.h | 29 +
GUI/Qt/Components/GeneralLayerInspector.ui | 208 +
GUI/Qt/Components/HistoryQListModel.cxx | 81 +
GUI/Qt/Components/HistoryQListModel.h | 45 +
GUI/Qt/Components/ImageInfoInspector.cxx | 52 +
GUI/Qt/Components/ImageInfoInspector.h | 29 +
GUI/Qt/Components/ImageInfoInspector.ui | 964 +++
GUI/Qt/Components/LabelInspector.cxx | 54 +
GUI/Qt/Components/LabelInspector.h | 33 +
GUI/Qt/Components/LabelInspector.ui | 431 ++
GUI/Qt/Components/LabelMiniInspector.cxx | 52 +
GUI/Qt/Components/LabelMiniInspector.h | 33 +
GUI/Qt/Components/LabelMiniInspector.ui | 280 +
GUI/Qt/Components/LabelSelectionButton.cxx | 307 +
GUI/Qt/Components/LabelSelectionButton.h | 73 +
GUI/Qt/Components/LatentITKEventNotifier.cxx | 186 +
GUI/Qt/Components/LatentITKEventNotifier.h | 88 +
GUI/Qt/Components/LayerInspectorRowDelegate.cxx | 473 ++
GUI/Qt/Components/LayerInspectorRowDelegate.h | 111 +
GUI/Qt/Components/LayerInspectorRowDelegate.ui | 433 ++
GUI/Qt/Components/MetadataInspector.cxx | 82 +
GUI/Qt/Components/MetadataInspector.h | 63 +
GUI/Qt/Components/MetadataInspector.ui | 103 +
GUI/Qt/Components/PaintbrushToolPanel.cxx | 58 +
GUI/Qt/Components/PaintbrushToolPanel.h | 27 +
GUI/Qt/Components/PaintbrushToolPanel.ui | 421 ++
GUI/Qt/Components/QActionButton.cxx | 46 +
GUI/Qt/Components/QActionButton.h | 31 +
GUI/Qt/Components/QColorButtonWidget.cxx | 35 +
GUI/Qt/Components/QColorButtonWidget.h | 33 +
GUI/Qt/Components/QDoubleSlider.cxx | 46 +
GUI/Qt/Components/QDoubleSlider.h | 69 +
GUI/Qt/Components/QDoubleSliderWithEditor.cxx | 162 +
GUI/Qt/Components/QDoubleSliderWithEditor.h | 65 +
GUI/Qt/Components/QDoubleSliderWithEditor.ui | 44 +
GUI/Qt/Components/QtCursorOverride.h | 42 +
GUI/Qt/Components/QtIPCManager.cxx | 33 +
GUI/Qt/Components/QtIPCManager.h | 38 +
GUI/Qt/Components/QtRendererPlatformSupport.cxx | 128 +
GUI/Qt/Components/QtRendererPlatformSupport.h | 23 +
GUI/Qt/Components/QtReporterDelegates.cxx | 154 +
GUI/Qt/Components/QtReporterDelegates.h | 92 +
GUI/Qt/Components/QtWarningDialog.cxx | 56 +
GUI/Qt/Components/QtWarningDialog.h | 40 +
GUI/Qt/Components/QtWarningDialog.ui | 105 +
GUI/Qt/Components/QtWidgetActivator.cxx | 75 +
GUI/Qt/Components/QtWidgetActivator.h | 102 +
GUI/Qt/Components/RecentHistoryItemsView.cxx | 98 +
GUI/Qt/Components/RecentHistoryItemsView.h | 51 +
GUI/Qt/Components/RecentHistoryItemsView.ui | 505 ++
GUI/Qt/Components/SNAPComponent.cxx | 46 +
GUI/Qt/Components/SNAPComponent.h | 46 +
GUI/Qt/Components/SNAPQtCommon.cxx | 533 ++
GUI/Qt/Components/SNAPQtCommon.h | 155 +
GUI/Qt/Components/SliceViewPanel.cxx | 503 ++
GUI/Qt/Components/SliceViewPanel.h | 108 +
GUI/Qt/Components/SliceViewPanel.ui | 983 +++
GUI/Qt/Components/SnakeToolROIPanel.cxx | 75 +
GUI/Qt/Components/SnakeToolROIPanel.h | 35 +
GUI/Qt/Components/SnakeToolROIPanel.ui | 342 +
GUI/Qt/Components/SnakeWizardPanel.cxx | 475 ++
GUI/Qt/Components/SnakeWizardPanel.h | 134 +
GUI/Qt/Components/SnakeWizardPanel.ui | 2081 ++++++
GUI/Qt/Components/SynchronizationInspector.cxx | 41 +
GUI/Qt/Components/SynchronizationInspector.h | 28 +
GUI/Qt/Components/SynchronizationInspector.ui | 204 +
GUI/Qt/Components/ViewPanel3D.cxx | 288 +
GUI/Qt/Components/ViewPanel3D.h | 109 +
GUI/Qt/Components/ViewPanel3D.ui | 312 +
GUI/Qt/Components/VoxelIntensityQTableModel.cxx | 116 +
GUI/Qt/Components/VoxelIntensityQTableModel.h | 100 +
GUI/Qt/Components/ZoomInspector.cxx | 96 +
GUI/Qt/Components/ZoomInspector.h | 65 +
GUI/Qt/Components/ZoomInspector.ui | 380 ++
GUI/Qt/Coupling/QtAbstractButtonCoupling.h | 160 +
GUI/Qt/Coupling/QtAbstractItemViewCoupling.h | 294 +
GUI/Qt/Coupling/QtActionCoupling.h | 36 +
GUI/Qt/Coupling/QtActionGroupCoupling.h | 49 +
GUI/Qt/Coupling/QtCheckBoxCoupling.h | 59 +
GUI/Qt/Coupling/QtCheckableWidgetGroupCoupling.h | 97 +
GUI/Qt/Coupling/QtColorWheelCoupling.h | 51 +
GUI/Qt/Coupling/QtComboBoxCoupling.h | 267 +
GUI/Qt/Coupling/QtDoubleSliderWithEditorCoupling.h | 84 +
GUI/Qt/Coupling/QtDoubleSpinBoxCoupling.h | 98 +
GUI/Qt/Coupling/QtLabelCoupling.h | 43 +
GUI/Qt/Coupling/QtLineEditCoupling.h | 122 +
GUI/Qt/Coupling/QtListWidgetCoupling.h | 141 +
GUI/Qt/Coupling/QtPagedWidgetCoupling.h | 106 +
GUI/Qt/Coupling/QtRadioButtonCoupling.h | 73 +
GUI/Qt/Coupling/QtScrollbarCoupling.h | 74 +
GUI/Qt/Coupling/QtSliderCoupling.h | 120 +
GUI/Qt/Coupling/QtSpinBoxCoupling.h | 88 +
GUI/Qt/Coupling/QtTableWidgetCoupling.cxx | 5 +
GUI/Qt/Coupling/QtTableWidgetCoupling.h | 299 +
GUI/Qt/Coupling/QtToolbarCoupling.h | 146 +
GUI/Qt/Coupling/QtWidgetArrayCoupling.h | 433 ++
GUI/Qt/Coupling/QtWidgetCoupling.h | 719 ++
GUI/Qt/External/ColorWheel/ColorWheel.cxx | 321 +
GUI/Qt/External/ColorWheel/ColorWheel.h | 65 +
GUI/Qt/ModelView/GMMTableModel.cxx | 351 +
GUI/Qt/ModelView/GMMTableModel.h | 91 +
COPYING => GUI/Qt/Resources/COPYING | 0
GUI/Qt/Resources/SNAPResources.qrc | 115 +
GUI/Qt/Resources/arrow_down_16.png | Bin 0 -> 939 bytes
GUI/Qt/Resources/arrow_up_16.png | Bin 0 -> 907 bytes
GUI/Qt/Resources/brush_shape_adaptive.png | Bin 0 -> 1210 bytes
GUI/Qt/Resources/brush_shape_round.png | Bin 0 -> 1199 bytes
GUI/Qt/Resources/brush_shape_square.png | Bin 0 -> 1153 bytes
GUI/Qt/Resources/combo_all_labels.png | Bin 0 -> 937 bytes
GUI/Qt/Resources/combo_visible_labels.png | Bin 0 -> 6502 bytes
GUI/Qt/Resources/configure.png | Bin 0 -> 1962 bytes
GUI/Qt/Resources/credits.html | 25 +
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GUI/Qt/Resources/crosshair3D.gif | Bin 0 -> 2405 bytes
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GUI/Qt/Resources/delete_22.png | Bin 0 -> 1586 bytes
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GUI/Qt/Resources/dl_toolbox.png | Bin 0 -> 1204 bytes
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GUI/Qt/Resources/expand_16.png | Bin 0 -> 1218 bytes
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GUI/Qt/Resources/icontabwidget.css | 30 +
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GUI/Qt/Windows/ImageIODialog.h | 22 +
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GUI/Qt/Windows/ImageIOWizard.cxx | 758 +++
GUI/Qt/Windows/ImageIOWizard.h | 178 +
GUI/Qt/Windows/ImageIOWizardSummaryPage.ui | 19 +
GUI/Qt/Windows/LabelEditorDialog.cxx | 198 +
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GUI/Qt/Windows/MainImageWindow.cxx | 1634 +++++
GUI/Qt/Windows/MainImageWindow.h | 351 +
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.../Windows/MeshExportWizard/MeshExportWizard.cxx | 21 +
GUI/Qt/Windows/MeshExportWizard/MeshExportWizard.h | 29 +
.../Windows/MeshExportWizard/MeshExportWizard.ui | 46 +
GUI/Qt/Windows/PreferencesDialog.cxx | 269 +
GUI/Qt/Windows/PreferencesDialog.h | 61 +
GUI/Qt/Windows/PreferencesDialog.ui | 1488 +++++
GUI/Qt/Windows/QtStyles.cxx | 97 +
GUI/Qt/Windows/QtStyles.h | 38 +
GUI/Qt/Windows/ReorientImageDialog.cxx | 105 +
GUI/Qt/Windows/ReorientImageDialog.h | 46 +
GUI/Qt/Windows/ReorientImageDialog.ui | 634 ++
GUI/Qt/Windows/ResampleDialog.cxx | 97 +
GUI/Qt/Windows/ResampleDialog.h | 40 +
GUI/Qt/Windows/ResampleDialog.ui | 463 ++
GUI/Qt/Windows/SaveModifiedLayersDialog.cxx | 247 +
GUI/Qt/Windows/SaveModifiedLayersDialog.h | 96 +
GUI/Qt/Windows/SaveModifiedLayersDialog.ui | 60 +
GUI/Qt/Windows/SimpleFileDialogWithHistory.cxx | 73 +
GUI/Qt/Windows/SimpleFileDialogWithHistory.h | 47 +
GUI/Qt/Windows/SimpleFileDialogWithHistory.ui | 93 +
GUI/Qt/Windows/SnakeParameterDialog.cxx | 218 +
GUI/Qt/Windows/SnakeParameterDialog.h | 46 +
GUI/Qt/Windows/SnakeParameterDialog.ui | 1019 +++
GUI/Qt/Windows/SpeedImageDialog.cxx | 158 +
GUI/Qt/Windows/SpeedImageDialog.h | 69 +
GUI/Qt/Windows/SpeedImageDialog.ui | 1260 ++++
GUI/Qt/Windows/SplashPanel.cxx | 16 +
GUI/Qt/Windows/SplashPanel.h | 22 +
GUI/Qt/Windows/SplashPanel.ui | 154 +
GUI/Qt/Windows/StatisticsDialog.cxx | 163 +
GUI/Qt/Windows/StatisticsDialog.h | 44 +
GUI/Qt/Windows/StatisticsDialog.ui | 125 +
GUI/Qt/main.cxx | 698 ++
GUI/Renderer/AbstractRenderer.cxx | 13 +
GUI/Renderer/AbstractRenderer.h | 62 +
GUI/Renderer/AbstractVTKRenderer.cxx | 127 +
GUI/Renderer/AbstractVTKRenderer.h | 65 +
GUI/Renderer/AbstractVTKSceneRenderer.cxx | 29 +
GUI/Renderer/AbstractVTKSceneRenderer.h | 49 +
GUI/Renderer/ColorMapRenderer.cxx | 223 +
GUI/Renderer/ColorMapRenderer.h | 33 +
GUI/Renderer/CrosshairsRenderer.cxx | 95 +
GUI/Renderer/CrosshairsRenderer.h | 55 +
GUI/Renderer/EdgePreprocessingSettingsRenderer.cxx | 87 +
GUI/Renderer/EdgePreprocessingSettingsRenderer.h | 44 +
GUI/Renderer/GLToPNG.cxx | 92 +
GUI/Renderer/GLToPNG.h | 58 +
GUI/Renderer/GMMRenderer.cxx | 177 +
GUI/Renderer/GMMRenderer.h | 46 +
GUI/Renderer/Generic3DRenderer.cxx | 796 +++
GUI/Renderer/Generic3DRenderer.h | 157 +
GUI/Renderer/GenericSliceRenderer.cxx | 594 ++
GUI/Renderer/GenericSliceRenderer.h | 149 +
GUI/Renderer/IntensityCurveVTKRenderer.cxx | 578 ++
GUI/Renderer/IntensityCurveVTKRenderer.h | 63 +
GUI/Renderer/LayerHistogramPlotAssembly.cxx | 101 +
GUI/Renderer/LayerHistogramPlotAssembly.h | 67 +
GUI/Renderer/OpenGLSliceTexture.cxx | 252 +
GUI/Renderer/OpenGLSliceTexture.h | 144 +
GUI/Renderer/OrientationGraphicRenderer.cxx | 93 +
GUI/Renderer/OrientationGraphicRenderer.h | 40 +
.../Reorient/AbstractScannerHelper.cxx | 29 +
.../Reorient/AbstractScannerHelper.h | 28 +
.../OrientationWidget/Reorient/AxesWidget.cxx | 105 +
.../OrientationWidget/Reorient/AxesWidget.h | 36 +
.../Reorient/PolyDataAlgorithm2ActorPipe.cxx | 37 +
.../Reorient/PolyDataAlgorithm2ActorPipe.h | 28 +
.../OrientationWidget/Reorient/ReorientProps.cxx | 103 +
.../OrientationWidget/Reorient/ReorientProps.h | 36 +
.../OrientationWidget/Reorient/ScannedHuman.cxx | 131 +
.../OrientationWidget/Reorient/ScannedHuman.h | 45 +
.../OrientationWidget/Reorient/ScanningROI.cxx | 320 +
.../OrientationWidget/Reorient/ScanningROI.h | 75 +
.../Test_OrientationWidget/CMakeLists.txt | 78 +
.../OrientationWidgetGUI.cxx | 149 +
.../Test_OrientationWidget/OrientationWidgetGUI.h | 39 +
.../Test_OrientationWidget/OrientationWidgetGUI.ui | 586 ++
.../Test_OrientationWidget/main.cxx | 27 +
.../Test_ReorientGUI/CMakeLists.txt | 57 +
.../Test_ReorientGUI/Reorient.cxx | 65 +
.../OrientationWidget/Test_ReorientGUI/Reorient.h | 35 +
.../Test_ReorientGUI/ReorientGUI.cxx | 136 +
.../Test_ReorientGUI/ReorientGUI.h | 34 +
.../Test_ReorientGUI/ReorientGUI.ui | 582 ++
.../OrientationWidget/Test_ReorientGUI/main.cxx | 23 +
GUI/Renderer/PaintbrushRenderer.cxx | 124 +
GUI/Renderer/PaintbrushRenderer.h | 31 +
GUI/Renderer/PolygonDrawingRenderer.cxx | 220 +
GUI/Renderer/PolygonDrawingRenderer.h | 37 +
GUI/Renderer/PolygonScanConvert.cxx | 177 +
GUI/Renderer/PolygonScanConvert.h | 94 +
GUI/Renderer/SliceWindowDecorationRenderer.cxx | 280 +
GUI/Renderer/SliceWindowDecorationRenderer.h | 30 +
GUI/Renderer/SnakeModeRenderer.cxx | 162 +
GUI/Renderer/SnakeModeRenderer.h | 31 +
GUI/Renderer/SnakeParameterPreviewRenderer.cxx | 189 +
GUI/Renderer/SnakeParameterPreviewRenderer.h | 58 +
GUI/Renderer/SnakeROIRenderer.cxx | 79 +
GUI/Renderer/SnakeROIRenderer.h | 27 +
GUI/Renderer/ThresholdSettingsRenderer.cxx | 115 +
GUI/Renderer/ThresholdSettingsRenderer.h | 47 +
GUI/Renderer/Window3DPicker.cxx | 119 +
GUI/Renderer/Window3DPicker.h | 34 +
Logic/Common/ColorLabel.h | 34 +-
Logic/Common/ColorLabelTable.cxx | 371 +-
Logic/Common/ColorLabelTable.h | 97 +-
Logic/Common/ColorMap.cxx | 325 +-
Logic/Common/ColorMap.h | 191 +-
Logic/Common/ColorMapPresetManager.cxx | 5 +
Logic/Common/ColorMapPresetManager.h | 38 +
Logic/Common/IRISDisplayGeometry.cxx | 66 +
Logic/Common/IRISDisplayGeometry.h | 41 +
Logic/Common/ImageCoordinateGeometry.cxx | 150 +-
Logic/Common/ImageCoordinateGeometry.h | 65 +-
Logic/Common/ImageRayIntersectionFinder.h | 2 +-
Logic/Common/ImageRayIntersectionFinder.txx | 2 +-
Logic/Common/LabelUseHistory.cxx | 153 +
Logic/Common/LabelUseHistory.h | 73 +
Logic/Common/MetaDataAccess.cxx | 159 +
Logic/Common/MetaDataAccess.h | 35 +
Logic/Common/SNAPAppearanceSettings.cxx | 401 ++
Logic/Common/SNAPAppearanceSettings.h | 222 +
Logic/Common/SNAPRegistryIO.cxx | 375 +-
Logic/Common/SNAPRegistryIO.h | 48 +-
Logic/Common/SNAPSegmentationROISettings.cxx | 44 +-
Logic/Common/SNAPSegmentationROISettings.h | 37 +-
Logic/Common/SegmentationStatistics.cxx | 217 +-
Logic/Common/SegmentationStatistics.h | 39 +-
Logic/Framework/DefaultBehaviorSettings.cxx | 32 +
Logic/Framework/DefaultBehaviorSettings.h | 66 +
Logic/Framework/GenericImageData.cxx | 453 +-
Logic/Framework/GenericImageData.h | 245 +-
Logic/Framework/GlobalState.cxx | 196 +-
Logic/Framework/GlobalState.h | 443 +-
Logic/Framework/IRISApplication.cxx | 1914 +++++-
Logic/Framework/IRISApplication.h | 511 +-
Logic/Framework/IRISImageData.cxx | 35 +-
Logic/Framework/IRISImageData.h | 39 +-
Logic/Framework/ImageIODelegates.cxx | 259 +
Logic/Framework/ImageIODelegates.h | 183 +
Logic/Framework/LayerAssociation.h | 80 +
Logic/Framework/LayerAssociation.txx | 112 +
Logic/Framework/LayerIterator.cxx | 219 +
Logic/Framework/LayerIterator.h | 97 +
Logic/Framework/SNAPImageData.cxx | 342 +-
Logic/Framework/SNAPImageData.h | 105 +-
Logic/Framework/UndoDataManager.h | 15 +
Logic/Framework/UndoDataManager.txx | 12 +
Logic/ImageWrapper/CPUImageToGPUImageFilter.h | 106 +
Logic/ImageWrapper/CPUImageToGPUImageFilter.hxx | 96 +
Logic/ImageWrapper/CommonRepresentationPolicy.cxx | 101 +
Logic/ImageWrapper/CommonRepresentationPolicy.h | 107 +
Logic/ImageWrapper/DisplayMappingPolicy.cxx | 975 +++
Logic/ImageWrapper/DisplayMappingPolicy.h | 552 ++
Logic/ImageWrapper/GreyImageWrapper.cxx | 202 -
Logic/ImageWrapper/GreyImageWrapper.h | 226 -
Logic/ImageWrapper/GuidedNativeImageIO.cxx | 1022 ++-
Logic/ImageWrapper/GuidedNativeImageIO.h | 186 +-
Logic/ImageWrapper/ImageIORoutines.h | 82 -
Logic/ImageWrapper/ImageWrapper.cxx | 1371 ++++
Logic/ImageWrapper/ImageWrapper.h | 602 +-
Logic/ImageWrapper/ImageWrapper.txx | 565 --
Logic/ImageWrapper/ImageWrapperBase.cxx | 97 +
Logic/ImageWrapper/ImageWrapperBase.h | 545 ++
Logic/ImageWrapper/ImageWrapperTraits.cxx | 2 +
Logic/ImageWrapper/ImageWrapperTraits.h | 247 +
Logic/ImageWrapper/InputSelectionImageFilter.cxx | 61 +
Logic/ImageWrapper/InputSelectionImageFilter.h | 71 +
Logic/ImageWrapper/LabelImageWrapper.cxx | 154 -
Logic/ImageWrapper/LabelImageWrapper.h | 154 -
Logic/ImageWrapper/LabelToRGBAFilter.h | 39 +-
Logic/ImageWrapper/LevelSetImageWrapper.cxx | 141 -
Logic/ImageWrapper/LevelSetImageWrapper.h | 116 -
Logic/ImageWrapper/NativeIntensityMappingPolicy.h | 83 +
Logic/ImageWrapper/RGBImageWrapper.cxx | 98 -
Logic/ImageWrapper/RGBImageWrapper.h | 90 -
Logic/ImageWrapper/ScalarImageHistogram.cxx | 126 +
Logic/ImageWrapper/ScalarImageHistogram.h | 90 +
Logic/ImageWrapper/ScalarImageWrapper.cxx | 357 +
Logic/ImageWrapper/ScalarImageWrapper.h | 242 +-
Logic/ImageWrapper/ScalarImageWrapper.txx | 269 -
Logic/ImageWrapper/SpeedColorMap.cxx | 105 -
Logic/ImageWrapper/SpeedColorMap.h | 134 -
Logic/ImageWrapper/SpeedImageWrapper.cxx | 219 -
Logic/ImageWrapper/SpeedImageWrapper.h | 241 -
Logic/ImageWrapper/ThreadedHistogramImageFilter.h | 137 +
.../ImageWrapper/ThreadedHistogramImageFilter.hxx | 167 +
Logic/ImageWrapper/UnaryValueToValueFilter.h | 73 +
Logic/ImageWrapper/VectorImageWrapper.cxx | 477 ++
Logic/ImageWrapper/VectorImageWrapper.h | 245 +-
Logic/ImageWrapper/VectorImageWrapper.txx | 42 -
Logic/ImageWrapper/VectorToScalarImageAccessor.h | 201 +
Logic/LevelSet/SNAPAdvectionFieldImageFilter.h | 8 +-
Logic/LevelSet/SNAPAdvectionFieldImageFilter.txx | 2 +-
Logic/LevelSet/SNAPLevelSetDriver.cxx | 351 -
Logic/LevelSet/SNAPLevelSetDriver.h | 49 +-
Logic/LevelSet/SNAPLevelSetDriver.txx | 85 +-
Logic/LevelSet/SNAPLevelSetFunction.h | 236 +-
Logic/LevelSet/SNAPLevelSetFunction.txx | 274 +-
Logic/LevelSet/SnakeParameters.cxx | 2 +-
Logic/LevelSet/SnakeParameters.h | 4 +
Logic/LevelSet/SnakeParametersPreviewPipeline.cxx | 630 ++
Logic/LevelSet/SnakeParametersPreviewPipeline.h | 230 +
Logic/Mesh/GuidedMeshIO.cxx | 13 +-
Logic/Mesh/GuidedMeshIO.h | 2 +-
Logic/Mesh/IRISMeshPipeline.cxx | 211 -
Logic/Mesh/IRISMeshPipeline.h | 135 -
Logic/Mesh/LevelSetMeshPipeline.cxx | 38 +-
Logic/Mesh/LevelSetMeshPipeline.h | 34 +-
.../Mesh}/MeshExportSettings.h | 0
Logic/Mesh/MeshManager.cxx | 443 ++
Logic/Mesh/MeshManager.h | 206 +
Logic/Mesh/MeshObject.cxx | 741 ---
Logic/Mesh/MeshObject.h | 265 -
Logic/Mesh/MeshOptions.cxx | 55 +-
Logic/Mesh/MeshOptions.h | 172 +-
Logic/Mesh/MultiLabelMeshPipeline.cxx | 392 ++
Logic/Mesh/MultiLabelMeshPipeline.h | 187 +
Logic/Mesh/VTKMeshPipeline.cxx | 88 +-
Logic/Mesh/VTKMeshPipeline.h | 12 +-
Logic/Preprocessing/EdgePreprocessingImageFilter.h | 139 +-
.../Preprocessing/EdgePreprocessingImageFilter.txx | 176 +-
Logic/Preprocessing/EdgePreprocessingSettings.cxx | 42 +-
Logic/Preprocessing/EdgePreprocessingSettings.h | 39 +-
Logic/Preprocessing/GMM/EMGaussianMixtures.cxx | 471 ++
Logic/Preprocessing/GMM/EMGaussianMixtures.h | 70 +
Logic/Preprocessing/GMM/Gaussian.cxx | 132 +
Logic/Preprocessing/GMM/Gaussian.h | 51 +
Logic/Preprocessing/GMM/GaussianMixtureModel.cxx | 182 +
Logic/Preprocessing/GMM/GaussianMixtureModel.h | 67 +
Logic/Preprocessing/GMM/KMeansPlusPlus.cxx | 180 +
Logic/Preprocessing/GMM/KMeansPlusPlus.h | 28 +
Logic/Preprocessing/GMM/UnsupervisedClustering.cxx | 263 +
Logic/Preprocessing/GMM/UnsupervisedClustering.h | 65 +
Logic/Preprocessing/GMMClassifyImageFilter.h | 75 +
Logic/Preprocessing/GMMClassifyImageFilter.txx | 161 +
Logic/Preprocessing/ImageCollectionToImageFilter.h | 301 +
.../PreprocessingFilterConfigTraits.cxx | 252 +
.../PreprocessingFilterConfigTraits.h | 158 +
.../RandomForest/Library/classification.h | 167 +
.../RandomForest/Library/classifier.h | 180 +
Logic/Preprocessing/RandomForest/Library/data.h | 360 +
Logic/Preprocessing/RandomForest/Library/forest.h | 114 +
Logic/Preprocessing/RandomForest/Library/imageio.h | 149 +
.../RandomForest/Library/linearalgebra.h | 227 +
Logic/Preprocessing/RandomForest/Library/node.h | 302 +
Logic/Preprocessing/RandomForest/Library/random.h | 45 +
.../RandomForest/Library/statistics.h | 567 ++
Logic/Preprocessing/RandomForest/Library/trainer.h | 325 +
.../RandomForest/Library/trainingcontext.h | 140 +
Logic/Preprocessing/RandomForest/Library/tree.h | 563 ++
Logic/Preprocessing/RandomForest/Library/type.h | 16 +
Logic/Preprocessing/RandomForest/Library/utility.h | 142 +
.../RandomForest/RFClassificationEngine.cxx | 194 +
.../RandomForest/RFClassificationEngine.h | 70 +
.../RandomForest/RandomForestClassifier.cxx | 51 +
.../RandomForest/RandomForestClassifier.h | 75 +
.../RandomForestClassifyImageFilter.h | 83 +
.../RandomForestClassifyImageFilter.txx | 172 +
Logic/Preprocessing/SlicePreviewFilterWrapper.h | 188 +
Logic/Preprocessing/SlicePreviewFilterWrapper.txx | 203 +
.../SmoothBinaryThresholdImageFilter.h | 153 +-
.../SmoothBinaryThresholdImageFilter.txx | 169 +-
Logic/Preprocessing/ThresholdSettings.cxx | 148 +-
Logic/Preprocessing/ThresholdSettings.h | 84 +-
Logic/Slicing/IRISSlicer.h | 56 +-
Logic/Slicing/IRISSlicer.txx | 474 +-
Logic/Slicing/IntensityCurveInterface.h | 22 +-
Logic/Slicing/IntensityCurveVTK.cxx | 21 +
Logic/Slicing/IntensityCurveVTK.h | 7 +-
.../IntensityToColorLookupTableImageFilter.cxx | 244 +
.../IntensityToColorLookupTableImageFilter.h | 190 +
.../Slicing/LookupTableIntensityMappingFilter.cxx | 93 +
Logic/Slicing/LookupTableIntensityMappingFilter.h | 63 +
Logic/Slicing/LookupTableTraits.h | 114 +
...omponentImageToScalarLookupTableImageFilter.cxx | 136 +
...iComponentImageToScalarLookupTableImageFilter.h | 81 +
.../RGBALookupTableIntensityMappingFilter.cxx | 66 +
.../RGBALookupTableIntensityMappingFilter.h | 55 +
Logic/Slicing/UnaryFunctorCache.h | 199 -
Logic/Slicing/UnaryFunctorCache.txx | 103 -
ReleaseNotes.txt | 420 +-
Testing/GUI/Qt/SNAPTestQt.cxx | 481 ++
Testing/GUI/Qt/SNAPTestQt.h | 118 +
Testing/GUI/Qt/Scripts/test_Library.js | 101 +
Testing/GUI/Qt/Scripts/test_ProbeIntensity.js | 16 +
Testing/GUI/Qt/Scripts/test_RandomForest.js | 89 +
Testing/GUI/Qt/Scripts/test_RegionCompetition.js | 56 +
Testing/GUI/Qt/Scripts/test_Workspace.js | 40 +
Testing/GUI/Qt/TestingScripts.qrc | 9 +
Testing/Logic/SNAPTestDriver.cxx | 256 +
Testing/{ => Logic}/SNAPTestDriver.h | 0
Testing/{ => Logic}/TestBase.h | 0
Testing/{ => Logic}/TestCompareLevelSets.cxx | 0
Testing/{ => Logic}/TestCompareLevelSets.h | 0
Testing/Logic/TestImageWrapper.h | 93 +
Testing/{ => Logic}/TestMain.cxx | 0
Testing/{ => Logic}/TutorialTest.cxx | 0
Testing/SNAPTestDriver.cxx | 256 -
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Testing/TestData/MRIcrop-seg.gipl.gz | Bin 0 -> 13417 bytes
Testing/TestData/MRIcrop-seg.label | 13 +
Testing/TestData/tensor.itksnap | 338 +
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Testing/TestData/tensor_tr.nii.gz | Bin 0 -> 90432 bytes
Testing/TestImageWrapper.h | 97 -
UserInterface/BasicComponents/ColorMapBox.cxx | 96 -
UserInterface/BasicComponents/ColorMapBox.h | 67 -
UserInterface/BasicComponents/ColorMapWidget.cxx | 420 --
UserInterface/BasicComponents/ColorMapWidget.h | 112 -
UserInterface/BasicComponents/FLTKCanvas.cxx | 232 -
UserInterface/BasicComponents/FLTKCanvas.h | 113 -
UserInterface/BasicComponents/FLTKEvent.h | 101 -
.../BasicComponents/FLTKWidgetActivationManager.h | 324 -
UserInterface/BasicComponents/FunctionPlot2D.cxx | 178 -
UserInterface/BasicComponents/FunctionPlot2D.h | 141 -
.../BasicComponents/FunctionPlot2DBox.cxx | 81 -
UserInterface/BasicComponents/FunctionPlot2DBox.h | 64 -
.../BasicComponents/IntensityCurveBox.cxx | 633 --
UserInterface/BasicComponents/IntensityCurveBox.h | 181 -
UserInterface/BasicComponents/InteractionMode.h | 157 -
.../BasicComponents/InteractionModeClient.cxx | 104 -
.../BasicComponents/InteractionModeClient.h | 81 -
UserInterface/BasicComponents/MetaDataTable.cxx | 313 -
UserInterface/BasicComponents/MetaDataTable.h | 75 -
.../BasicComponents/RecursiveInteractionMode.cxx | 144 -
.../BasicComponents/RecursiveInteractionMode.h | 60 -
.../BasicComponents/SNAPFormattedOutput.h | 72 -
UserInterface/BasicComponents/SNAPValueOutput.h | 68 -
.../BasicComponents/SnakeParametersPreviewBox.cxx | 346 -
.../BasicComponents/SnakeParametersPreviewBox.h | 125 -
.../SnakeParametersPreviewPipeline.cxx | 628 --
.../SnakeParametersPreviewPipeline.h | 219 -
UserInterface/BasicComponents/StatisticsTable.cxx | 220 -
UserInterface/BasicComponents/StatisticsTable.h | 69 -
UserInterface/Common/SNAPAppearanceSettings.cxx | 422 --
UserInterface/Common/SNAPAppearanceSettings.h | 220 -
UserInterface/Common/SNAPCommonUI.h | 51 -
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UserInterface/ImageIOWizard/ImageIOWizard.fl | 421 --
UserInterface/ImageIOWizard/ImageIOWizardBase.h | 69 -
UserInterface/ImageIOWizard/ImageIOWizardLogic.cxx | 1194 ----
UserInterface/ImageIOWizard/ImageIOWizardLogic.h | 329 -
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UserInterface/MainComponents/AppearanceDialogUI.fl | 518 --
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UserInterface/MainComponents/HelpViewer.fl | 40 -
UserInterface/MainComponents/HelpViewerBase.h | 48 -
UserInterface/MainComponents/HelpViewerLogic.cxx | 188 -
UserInterface/MainComponents/HelpViewerLogic.h | 86 -
UserInterface/MainComponents/LabelEditorUI.fl | 214 -
UserInterface/MainComponents/LabelEditorUIBase.h | 61 -
.../MainComponents/LabelEditorUILogic.cxx | 644 --
UserInterface/MainComponents/LabelEditorUILogic.h | 103 -
UserInterface/MainComponents/LayerInspectorUI.fl | 412 --
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.../MainComponents/LayerInspectorUILogic.cxx | 1115 ----
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UserInterface/MainComponents/PreprocessingUI.fl | 163 -
UserInterface/MainComponents/PreprocessingUIBase.h | 67 -
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UserInterface/MainComponents/ReorientImageUI.fl | 219 -
UserInterface/MainComponents/ReorientImageUIBase.h | 52 -
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UserInterface/MainComponents/ResizeRegionDialog.fl | 251 -
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UserInterface/MainComponents/UserInterfaceBase.h | 330 -
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UserInterface/MainComponents/UserInterfaceLogic.h | 1543 -----
UserInterface/MeshIOWizard/MeshIOWizardUI.fl | 128 -
UserInterface/MeshIOWizard/MeshIOWizardUIBase.h | 61 -
UserInterface/MeshIOWizard/MeshIOWizardUILogic.cxx | 426 --
UserInterface/MeshIOWizard/MeshIOWizardUILogic.h | 133 -
UserInterface/SNAPMain.cxx | 777 ---
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UserInterface/SliceWindow/BubblesInteractionMode.h | 58 -
.../SliceWindow/CrosshairsInteractionMode.cxx | 431 --
.../SliceWindow/CrosshairsInteractionMode.h | 99 -
UserInterface/SliceWindow/GLToPNG.cxx | 100 -
UserInterface/SliceWindow/GLToPNG.h | 60 -
UserInterface/SliceWindow/GenericSliceWindow.cxx | 950 ---
UserInterface/SliceWindow/GenericSliceWindow.h | 361 -
UserInterface/SliceWindow/IRISSliceWindow.cxx | 300 -
UserInterface/SliceWindow/IRISSliceWindow.h | 185 -
UserInterface/SliceWindow/OpenGLSliceTexture.cxx | 238 -
UserInterface/SliceWindow/OpenGLSliceTexture.h | 150 -
.../SliceWindow/PaintbrushInteractionMode.cxx | 760 ---
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UserInterface/SliceWindow/PolygonDrawing.cxx | 1399 ----
UserInterface/SliceWindow/PolygonDrawing.h | 246 -
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UserInterface/SliceWindow/PolygonInteractionMode.h | 108 -
UserInterface/SliceWindow/PolygonScanConvert.cxx | 177 -
UserInterface/SliceWindow/PolygonScanConvert.h | 94 -
.../SliceWindow/PopupButtonInteractionMode.cxx | 120 -
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.../SliceWindow/RegionInteractionMode.cxx | 350 -
UserInterface/SliceWindow/RegionInteractionMode.h | 94 -
UserInterface/SliceWindow/SNAPSliceWindow.cxx | 179 -
UserInterface/SliceWindow/SNAPSliceWindow.h | 85 -
.../SliceWindow/SliceWindowCoordinator.cxx | 239 -
UserInterface/SliceWindow/SliceWindowCoordinator.h | 141 -
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UserInterface/SliceWindow/ZoomPanInteractionMode.h | 67 -
UserInterface/Window3D/Trackball.h | 129 -
UserInterface/Window3D/Window3D.cxx | 1551 -----
UserInterface/Window3D/Window3D.h | 365 -
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