[med-svn] r18621 - trunk/packages/rna-star/trunk/debian

[Andreas Tille]

Author: tille
Date: 2015-01-29 12:27:52 +0000 (Thu, 29 Jan 2015)
New Revision: 18621

Added:
   trunk/packages/rna-star/trunk/debian/watch
Modified:
   trunk/packages/rna-star/trunk/debian/README.source
   trunk/packages/rna-star/trunk/debian/compat
   trunk/packages/rna-star/trunk/debian/control
   trunk/packages/rna-star/trunk/debian/copyright
   trunk/packages/rna-star/trunk/debian/rules
Log:
Make sure we can get a source tarball via uscan with proper content


Modified: trunk/packages/rna-star/trunk/debian/README.source
===================================================================
--- trunk/packages/rna-star/trunk/debian/README.source	2015-01-29 11:39:34 UTC (rev 18620)
+++ trunk/packages/rna-star/trunk/debian/README.source	2015-01-29 12:27:52 UTC (rev 18621)
@@ -1,8 +1,6 @@
 star for Debian
 ---------------
 
- * removed all binaries with rm bin/*/STAR
- * removed source/htslib
  * removed .gitignore
 
 

Modified: trunk/packages/rna-star/trunk/debian/compat
===================================================================
--- trunk/packages/rna-star/trunk/debian/compat	2015-01-29 11:39:34 UTC (rev 18620)
+++ trunk/packages/rna-star/trunk/debian/compat	2015-01-29 12:27:52 UTC (rev 18621)
@@ -1 +1 @@
-8
+9

Modified: trunk/packages/rna-star/trunk/debian/control
===================================================================
--- trunk/packages/rna-star/trunk/debian/control	2015-01-29 11:39:34 UTC (rev 18620)
+++ trunk/packages/rna-star/trunk/debian/control	2015-01-29 12:27:52 UTC (rev 18621)
@@ -2,11 +2,11 @@
 Section: science
 Priority: optional
 Maintainer: Steffen Moeller <moeller at debian.org>
-Build-Depends: debhelper (>= 8.0.0), libhts-dev
+Build-Depends: debhelper (>= 9), libhts-dev
 Standards-Version: 3.9.6
 Homepage: https://code.google.com/p/rna-star/
-#Vcs-Git: git://git.debian.org/collab-maint/star.git
-#Vcs-Browser: http://git.debian.org/?p=collab-maint/star.git;a=summary
+Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/rna-star/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/rna-star/trunk/
 
 Package: rna-star
 Architecture: any

Modified: trunk/packages/rna-star/trunk/debian/copyright
===================================================================
--- trunk/packages/rna-star/trunk/debian/copyright	2015-01-29 11:39:34 UTC (rev 18620)
+++ trunk/packages/rna-star/trunk/debian/copyright	2015-01-29 12:27:52 UTC (rev 18621)
@@ -1,6 +1,8 @@
 Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: star
-Source: <url://example.com>
+Source: https://github.com/alexdobin/STAR/releases
+Files-Excluded: bin/*
+                source/htslib
 
 Files: *
 Copyright: <years> <put author's name and email here>

Modified: trunk/packages/rna-star/trunk/debian/rules
===================================================================
--- trunk/packages/rna-star/trunk/debian/rules	2015-01-29 11:39:34 UTC (rev 18620)
+++ trunk/packages/rna-star/trunk/debian/rules	2015-01-29 12:27:52 UTC (rev 18621)
@@ -1,10 +1,5 @@
 #!/usr/bin/make -f
 # -*- makefile -*-
-# Sample debian/rules that uses debhelper.
-# This file was originally written by Joey Hess and Craig Small.
-# As a special exception, when this file is copied by dh-make into a
-# dh-make output file, you may use that output file without restriction.
-# This special exception was added by Craig Small in version 0.37 of dh-make.
 
 # Uncomment this to turn on verbose mode.
 #export DH_VERBOSE=1
@@ -28,3 +23,6 @@
 
 override_dh_auto_clean:
 	cd source && $(MAKE) clean
+
+get-orig-source:
+	uscan --verbose --force-download --repack --compress xz

Added: trunk/packages/rna-star/trunk/debian/watch
===================================================================
--- trunk/packages/rna-star/trunk/debian/watch	                        (rev 0)
+++ trunk/packages/rna-star/trunk/debian/watch	2015-01-29 12:27:52 UTC (rev 18621)
@@ -0,0 +1,3 @@
+version=3
+
+https://github.com/alexdobin/STAR/releases .*/archive/STAR_(\d[\d.a-z]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)