[med-svn] [probabel] branch master updated (bf79dd1 -> 2ee2953)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch master
in repository probabel.

      from  bf79dd1   cme fix dpkg-control
      adds  80a055f   Imported Upstream version 0.4.3
       new  a17cb63   Imported Upstream version 0.4.5
       new  a3a1767   Merge tag 'upstream/0.4.5'
       new  2ee2953   New upstream version; use Arch: any in d/control

The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
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Summary of changes:
 Makefile.in                                 |  745 +++++++++
 aclocal.m4                                  |    3 +-
 checks/Makefile.am                          |   18 +-
 checks/Makefile.in                          |  955 ++++++++++++
 checks/R-tests/Makefile.am                  |   15 +-
 checks/R-tests/Makefile.in                  |  881 +++++++++++
 checks/R-tests/run_model_coxph.R            |   65 +-
 checks/R-tests/run_models_in_R_pacox.R      |   85 +-
 checks/inputfiles/coxph_data_nocovar.txt    |  201 +++
 checks/{test_cox.sh => test_cox_nocovar.sh} |   29 +-
 compile                                     |  143 ++
 configure                                   |   21 +-
 configure.ac                                |    2 +-
 debian/changelog                            |    9 +
 debian/control                              |    2 +-
 depcomp                                     |  630 ++++++++
 doc/ChangeLog                               |   20 +
 doc/Makefile.in                             |  568 +++++++
 doc/ProbABEL_manual.tex                     |   58 +-
 doc/pacoxph.1                               |    5 +-
 doc/palinear.1                              |    2 +-
 doc/palogist.1                              |    4 +-
 doc/probabel.1                              |    2 +-
 doc/probabel.pl.1                           |    2 +-
 examples/Makefile.in                        |  629 ++++++++
 install-sh                                  |  520 +++++++
 src/Makefile.in                             | 2174 +++++++++++++++++++++++++++
 src/command_line_settings.cpp               |    2 +-
 src/coxph_data.cpp                          |   66 +-
 src/fvlib/CastUtils.h                       |    3 +
 src/phedata.cpp                             |    9 +-
 31 files changed, 7757 insertions(+), 111 deletions(-)
 create mode 100644 Makefile.in
 create mode 100644 checks/Makefile.in
 create mode 100644 checks/R-tests/Makefile.in
 create mode 100644 checks/inputfiles/coxph_data_nocovar.txt
 copy checks/{test_cox.sh => test_cox_nocovar.sh} (64%)
 create mode 100755 compile
 create mode 100755 depcomp
 create mode 100644 doc/Makefile.in
 create mode 100644 examples/Makefile.in
 create mode 100755 install-sh
 create mode 100644 src/Makefile.in

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