[med-svn] [plink1.9] branch master updated (5b8c6aa -> 5513936)

[Dylan Aïssi]

This is an automated email from the git hooks/post-receive script.

bob.dybian-guest pushed a change to branch master
in repository plink1.9.

      from  5b8c6aa   Refresh patch
       new  abaa4fb   Imported Upstream version 1.90~b3u-150703
       new  5513936   Merge tag 'upstream/1.90_b3u-150703'

The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 pigz.c          |  17 ++-
 plink.c         | 402 ++++++++++++++++++++++++++++++++++---------------
 plink_assoc.c   |   9 +-
 plink_calc.c    |   8 +-
 plink_cluster.c | 343 +++++++++++++++++++++++++++++++++++++++---
 plink_cluster.h |  19 ++-
 plink_common.c  |  52 ++++++-
 plink_common.h  |  82 +++++-----
 plink_data.c    | 104 ++++++++-----
 plink_dosage.c  |  61 +++++++-
 plink_dosage.h  |   1 +
 plink_family.c  |  90 +++++------
 plink_family.h  |   2 +-
 plink_filter.c  |  88 ++++-------
 plink_help.c    |  30 ++--
 plink_lasso.c   | 456 +++++++++++++++++++++++++++++++++++---------------------
 plink_ld.c      |   1 +
 plink_matrix.h  |   7 +
 plink_misc.c    | 226 ++++++++++++++++++++++++++--
 plink_misc.h    |   2 +
 plink_stats.c   |  10 +-
 21 files changed, 1454 insertions(+), 556 deletions(-)

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