[med-svn] [python-pysam] 02/06: refresh older patches

[Afif Elghraoui]

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afif-guest pushed a commit to branch master
in repository python-pysam.

commit 622705e52e2d0ebda4049c304c9677ec6d4bd68b
Author: Afif Elghraoui <afif at ghraoui.name>
Date:   Sat Jul 11 14:03:24 2015 -0700

    refresh older patches
---
 debian/patches/adding-include-hts-dirs                   | 6 +++---
 debian/patches/change-htslib-statement-to-link-to-debian | 6 +++---
 2 files changed, 6 insertions(+), 6 deletions(-)

diff --git a/debian/patches/adding-include-hts-dirs b/debian/patches/adding-include-hts-dirs
index ff5dd49..129fa82 100644
--- a/debian/patches/adding-include-hts-dirs
+++ b/debian/patches/adding-include-hts-dirs
@@ -1,7 +1,7 @@
 Description: Added the include dirs
---- a/setup.py
-+++ b/setup.py
-@@ -92,6 +92,7 @@
+--- python-pysam.orig/setup.py
++++ python-pysam/setup.py
+@@ -103,6 +103,7 @@
      chtslib_sources = []
      shared_htslib_sources = htslib_sources
      htslib_library_dirs = HTSLIB_LIBRARY_DIR
diff --git a/debian/patches/change-htslib-statement-to-link-to-debian b/debian/patches/change-htslib-statement-to-link-to-debian
index bd77a16..045e302 100644
--- a/debian/patches/change-htslib-statement-to-link-to-debian
+++ b/debian/patches/change-htslib-statement-to-link-to-debian
@@ -1,6 +1,6 @@
 Description: Trying to bind to debian htslib
---- a/setup.py
-+++ b/setup.py
+--- python-pysam.orig/setup.py
++++ python-pysam/setup.py
 @@ -30,7 +30,7 @@
  #         pysam.
  # external: use shared libhts.so compiled outside of
@@ -10,7 +10,7 @@ Description: Trying to bind to debian htslib
  HTSLIB_LIBRARY_DIR = os.environ.get('HTSLIB_LIBRARY_DIR', None)
  HTSLIB_INCLUDE_DIR = os.environ.get('HTSLIB_INCLUDE_DIR', None)
  
-@@ -87,6 +87,12 @@
+@@ -98,6 +98,12 @@
      htslib_library_dirs = ['pysam']
      htslib_include_dirs = ['htslib']
      htslib_libraries = ['chtslib']

-- 
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