[med-svn] [bedtools] 03/03: link to genomes files in autopkgtests to enable more tests passing

Andreas Tille tille at debian.org
Tue Jul 14 10:49:26 UTC 2015


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tille pushed a commit to branch debian/unstable
in repository bedtools.

commit ca348651af1f7dceeeda562ed37902f5ed56e41e
Author: Andreas Tille <tille at debian.org>
Date:   Tue Jul 14 12:39:25 2015 +0200

    link to genomes files in autopkgtests to enable more tests passing
---
 debian/changelog      | 1 +
 debian/tests/upstream | 6 +++++-
 2 files changed, 6 insertions(+), 1 deletion(-)

diff --git a/debian/changelog b/debian/changelog
index eeed671..c6196a1 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -2,6 +2,7 @@ bedtools (2.24.0-2) UNRELEASED; urgency=medium
 
   * Tests need bgzip from tabix package
   * Add missing input files for tests
+  * link to genomes files in autopkgtests to enable more tests passing
 
  -- Andreas Tille <tille at debian.org>  Tue, 14 Jul 2015 11:01:25 +0200
 
diff --git a/debian/tests/upstream b/debian/tests/upstream
index 5f68676..2ccba84 100755
--- a/debian/tests/upstream
+++ b/debian/tests/upstream
@@ -7,6 +7,10 @@ fi
 # Copy test suite there
 cp -a /usr/share/bedtools/test $ADTTMP
 
+# Link to genomes files
+cd $ADTTMP
+ln -s /usr/share/bedtools/genomes
+
 # Enter the directory and run the tests
 cd $ADTTMP/test
 DATA=/usr/share/bedtools/data BT=/usr/bin/bedtools sh test.sh | tee test.sh.output
@@ -17,6 +21,6 @@ grep -q fail test.sh.output && TESTFAILED=1
 
 # Clean
 cd
-rm -rf $ADTTMP/test
+# rm -rf $ADTTMP/test
 
 exit $TESTFAILED

-- 
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