[med-svn] [hyphy] 01/02: Make sure that also in tests the existence of SSE3 extension is done

Andreas Tille tille at debian.org
Thu Jul 23 15:31:24 UTC 2015


This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository hyphy.

commit f1732a6bab8dc06dc6e470a885253a3487f7898f
Author: Andreas Tille <tille at debian.org>
Date:   Thu Jul 23 17:13:36 2015 +0200

    Make sure that also in tests the existence of SSE3 extension is done
---
 debian/changelog                                   |  2 ++
 debian/patches/msse_option_only_if_available.patch | 32 ++++++++++++++++++++++
 debian/patches/series                              |  1 +
 3 files changed, 35 insertions(+)

diff --git a/debian/changelog b/debian/changelog
index 2d40819..c030dab 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -7,6 +7,8 @@ hyphy (2.2.5+dfsg-2) UNRELEASED; urgency=medium
   * Disable unneded test that breaks on 32 bit architectures (Thanks for
     the hint to Jakub Wilk <jwilk at debian.org>)
     Closes: #793346
+  * Make sure that also in tests the existence of SSE3 extension is done
+    Closes: #793344
 
  -- Andreas Tille <tille at debian.org>  Thu, 23 Jul 2015 13:12:54 +0200
 
diff --git a/debian/patches/msse_option_only_if_available.patch b/debian/patches/msse_option_only_if_available.patch
new file mode 100644
index 0000000..1f70cd8
--- /dev/null
+++ b/debian/patches/msse_option_only_if_available.patch
@@ -0,0 +1,32 @@
+Description: Make sure that also in tests the existence of SSE3 extension is done
+Bug-Debian: http://bugs.debian.org/793344
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Thu, 23 Jul 2015 13:12:54 +0200
+
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -454,13 +454,23 @@ set_property(
+     TARGET HYPHYGTEST
+     APPEND PROPERTY COMPILE_DEFINITIONS __UNITTEST__
+ )
++
++PCL_CHECK_FOR_SSE3()
++if(${HAVE_SSE3_EXTENSIONS})
+ set_target_properties(
+     HYPHYGTEST
+     PROPERTIES
+     COMPILE_FLAGS "${DEFAULT_COMPILE_FLAGS} ${OpenMP_CXX_FLAGS} -msse3"
+     LINK_FLAGS "${DEFAULT_COMPILE_FLAGS} ${OpenMP_CXX_FLAGS} -msse3"
+ )
+-
++else(${HAVE_SSE3_EXTENSIONS})
++set_target_properties(
++    HYPHYGTEST
++    PROPERTIES
++    COMPILE_FLAGS "${DEFAULT_COMPILE_FLAGS} ${OpenMP_CXX_FLAGS}"
++    LINK_FLAGS "${DEFAULT_COMPILE_FLAGS} ${OpenMP_CXX_FLAGS}"
++)
++endif(${HAVE_SSE3_EXTENSIONS})
+ 
+ #-------------------------------------------------------------------------------
+ # hyphy gtk+ target
diff --git a/debian/patches/series b/debian/patches/series
index 8558cf8..18e3f96 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -3,3 +3,4 @@ use_debian_sqlite.patch
 spelling.patch
 drop_profiling_option.patch
 remove_unneeded_test.patch
+msse_option_only_if_available.patch

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/hyphy.git



More information about the debian-med-commit mailing list