[med-svn] [pycorrfit] branch master updated (d631a9a -> 0bd0fc0)

[Alex Mestiashvili]

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malex-guest pushed a change to branch master
in repository pycorrfit.

      from  d631a9a   d/control: set Architecture to any to fix  lintian's complain: arch-independent-package-contains-binary-or-object d/patches/inst_read_pt3_scripts.patch: add the header
       new  98a1485   d/copyright: add Files-Excluded section
       new  aa1fa00   d/patches: deleted d/rules: new get-orig-source target d/get-orig-source: deleted
       new  6937d28   d/watch: add +dfsg suffix
       new  e705b9f   Imported Upstream version 0.8.8+dfsg
       new  5e31396   Merge tag 'upstream/0.8.8+dfsg'
       new  03d1414   d/changelog: update
       new  3382e49   d/copyright: update
       new  723732b   d/source/options: ignore generated files
       new  88007d4   d/pycorrfit.pyremove: remove, as we need the egg-info directory d/source/options: remove generated files
       new  fcc6b7a   d/rules: remove duplicated LICENSE file
       new  31cbd66   d/changelog: group changes d/source/options: improve the regexp for extend-diff-ignore
       new  0bd0fc0   d/changelog: upload to unstable

The 12 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 .gitignore                                         |  66 --
 ChangeLog.txt                                      |  36 +-
 .../readfiles/read_pt3_scripts/LICENSE => LICENSE  |  75 +--
 MANIFEST.in                                        |   7 +-
 README.md                                          |   7 +-
 bin/pycorrfit                                      |   4 -
 debian/changelog                                   |  22 +-
 debian/copyright                                   |  19 +-
 debian/get-orig-source                             |  27 -
 debian/patches/fcs_data_set_syntax.patch           |  13 -
 debian/patches/inst_read_pt3_scripts.patch         |  17 -
 debian/patches/series                              |   2 -
 debian/pycorrfit.pyremove                          |   1 -
 debian/rules                                       |   8 +-
 debian/source/options                              |   1 +
 debian/watch                                       |   3 +-
 doc/PyCorrFit_doc_content.tex                      |  44 +-
 pycorrfit/PyCorrFit.py                             |   4 +-
 pycorrfit/__init__.py                              |  30 +-
 pycorrfit/__main__.py                              |  23 +-
 pycorrfit/doc.py                                   |  55 +-
 pycorrfit/edclasses.py                             |  34 +-
 pycorrfit/fcs_data_set.py                          | 739 ---------------------
 pycorrfit/fitting.py                               |  24 +-
 pycorrfit/frontend.py                              | 119 ++--
 pycorrfit/main.py                                  |  64 +-
 pycorrfit/misc.py                                  |  26 +-
 pycorrfit/models/MODEL_TIRF_1C.py                  |  43 +-
 pycorrfit/models/MODEL_TIRF_2D2D.py                |  58 +-
 pycorrfit/models/MODEL_TIRF_3D2D.py                |  39 +-
 pycorrfit/models/MODEL_TIRF_3D2Dkin_Ries.py        |  81 +--
 pycorrfit/models/MODEL_TIRF_3D3D.py                |  43 +-
 pycorrfit/models/MODEL_TIRF_gaussian_1C.py         |  22 +-
 pycorrfit/models/MODEL_TIRF_gaussian_3D2D.py       |  86 +--
 pycorrfit/models/MODEL_TIRF_gaussian_3D3D.py       |  68 +-
 pycorrfit/models/MODEL_classic_gaussian_2D.py      |  42 +-
 pycorrfit/models/MODEL_classic_gaussian_3D.py      |  79 ++-
 pycorrfit/models/MODEL_classic_gaussian_3D2D.py    |  44 +-
 pycorrfit/models/__init__.py                       | 253 ++++---
 pycorrfit/openfile.py                              |  32 +-
 pycorrfit/page.py                                  |  67 +-
 pycorrfit/plotting.py                              |  65 +-
 pycorrfit/readfiles/__init__.py                    |  24 +-
 pycorrfit/readfiles/read_ASC_ALV.py                |  58 +-
 pycorrfit/readfiles/read_CSV_PyCorrFit.py          |  21 +-
 pycorrfit/readfiles/read_FCS_Confocor3.py          |  85 +--
 pycorrfit/readfiles/read_SIN_correlator_com.py     |  18 +-
 pycorrfit/readfiles/read_mat_ries.py               |  62 +-
 pycorrfit/readfiles/read_pt3_PicoQuant.py          |  36 +-
 pycorrfit/tools/__init__.py                        |  73 +-
 pycorrfit/tools/average.py                         |  40 +-
 pycorrfit/tools/background.py                      |  39 +-
 pycorrfit/tools/batchcontrol.py                    |  32 +-
 pycorrfit/tools/chooseimport.py                    |  33 +-
 pycorrfit/tools/comment.py                         |  30 +-
 pycorrfit/tools/datarange.py                       |  30 +-
 pycorrfit/tools/example.py                         |  38 +-
 pycorrfit/tools/globalfit.py                       |  39 +-
 pycorrfit/tools/info.py                            |  32 +-
 pycorrfit/tools/overlaycurves.py                   |  35 +-
 pycorrfit/tools/parmrange.py                       |  44 +-
 pycorrfit/tools/plotexport.py                      |  32 +-
 pycorrfit/tools/simulation.py                      |  48 +-
 pycorrfit/tools/statistics.py                      |  52 +-
 pycorrfit/tools/trace.py                           |  30 +-
 pycorrfit/usermodel.py                             |  60 +-
 setup.py                                           | 112 ++--
 67 files changed, 934 insertions(+), 2661 deletions(-)
 delete mode 100644 .gitignore
 copy pycorrfit/readfiles/read_pt3_scripts/LICENSE => LICENSE (84%)
 delete mode 100644 bin/pycorrfit
 delete mode 100755 debian/get-orig-source
 delete mode 100644 debian/patches/fcs_data_set_syntax.patch
 delete mode 100644 debian/patches/inst_read_pt3_scripts.patch
 delete mode 100644 debian/patches/series
 delete mode 100644 debian/pycorrfit.pyremove
 create mode 100644 debian/source/options
 delete mode 100644 pycorrfit/fcs_data_set.py

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