[med-svn] [gmap] branch upstream updated (877e0f4 -> 15c4dbd)

[Alex Mestiashvili]

This is an automated email from the git hooks/post-receive script.

malex-guest pushed a change to branch upstream
in repository gmap.

      from  877e0f4   Imported Upstream version 2014-12-25
       new  15c4dbd   Imported Upstream version 2014-12-29

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 ChangeLog       |   60 ++
 VERSION         |    2 +-
 configure       |   24 +-
 src/chimera.c   |    3 +-
 src/iit-read.c  |   64 +-
 src/list.c      |   16 +-
 src/list.h      |    3 +-
 src/pair.c      |   48 +-
 src/pair.h      |    4 +-
 src/stage3hr.c  | 2422 +++++++++++++++++++++++++++++++++++++++++--------------
 src/substring.c |  105 ++-
 src/substring.h |   17 +-
 12 files changed, 2049 insertions(+), 719 deletions(-)

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/gmap.git