[med-svn] r19323 - in trunk/packages/genometools/tags: . 1.5.5-2/debian
Sascha Steinbiss
sascha-guest at moszumanska.debian.org
Wed Jun 10 11:06:31 UTC 2015
Author: sascha-guest
Date: 2015-06-10 11:06:30 +0000 (Wed, 10 Jun 2015)
New Revision: 19323
Added:
trunk/packages/genometools/tags/1.5.5-2/
trunk/packages/genometools/tags/1.5.5-2/debian/changelog
trunk/packages/genometools/tags/1.5.5-2/debian/rules
Removed:
trunk/packages/genometools/tags/1.5.5-2/debian/changelog
trunk/packages/genometools/tags/1.5.5-2/debian/rules
Log:
[svn-buildpackage] Tagging genometools 1.5.5-2
Deleted: trunk/packages/genometools/tags/1.5.5-2/debian/changelog
===================================================================
--- trunk/packages/genometools/trunk/debian/changelog 2015-06-08 18:56:54 UTC (rev 19320)
+++ trunk/packages/genometools/tags/1.5.5-2/debian/changelog 2015-06-10 11:06:30 UTC (rev 19323)
@@ -1,161 +0,0 @@
-genometools (1.5.5-1) unstable; urgency=low
-
- * New upstream release.
-
- -- Sascha Steinbiss <sascha at steinbiss.name> Sat, 06 Jun 2015 09:49:49 +0000
-
-genometools (1.5.4-2) experimental; urgency=low
-
- * Work towards reproducibility.
-
- -- Sascha Steinbiss <sascha at steinbiss.name> Sun, 22 Mar 2015 08:09:07 +0000
-
-genometools (1.5.4-1) experimental; urgency=low
-
- * New upstream release.
-
- -- Sascha Steinbiss <sascha at steinbiss.name> Fri, 12 Dec 2014 12:06:42 +0000
-
-genometools (1.5.3-2) unstable; urgency=low
-
- * Reactivate missing patch.
-
- -- Sascha Steinbiss <sascha at steinbiss.name> Fri, 05 Sep 2014 14:23:31 +0100
-
-genometools (1.5.3-1) unstable; urgency=low
-
- * New upstream release.
-
- -- Sascha Steinbiss <sascha at steinbiss.name> Wed, 16 Jul 2014 20:32:19 +0100
-
-genometools (1.5.2-4) unstable; urgency=low
-
- * Incorporate patches addressing type conversion errors (thanks to
- Michael Tautschnig).
- Closes: #748305
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Sat, 24 May 2014 18:57:45 +0000
-
-genometools (1.5.2-3) unstable; urgency=low
-
- * Address building issues on s390x, powerpc and armhf
- * Don't use -m64 for arm64 (thanks to Logan Rosen)
- Closes: #748708
- * Build-depend on docbook-xsl to fix FTBFS while offline (thanks to
- Logan Rosen)
- Closes: #748709
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Mon, 19 May 2014 23:06:34 +0000
-
-genometools (1.5.2-2) unstable; urgency=low
-
- * Split manuals into separate documents to avoid strange LaTeX build issues.
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Thu, 15 May 2014 23:23:20 +0000
-
-genometools (1.5.2-1) unstable; urgency=low
-
- * New upstream release.
- * Remove symbols file because private symbols are exported (next upstream
- version will properly control exported symbols and a new symbols file
- will be created and maintained)
- * Remove manpages from debian directory as they are now autogenerated on
- build
- * Fix some missing symbols problems
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Thu, 15 May 2014 10:51:41 +0000
-
-genometools (1.5.1-3) unstable; urgency=low
-
- * debian/rules
- - Add basic tests to check whether cairo/pango linking works
- - Clean up indices created by tests to make repeated builds possible
- - Make sure bin/examples/sketch_parsed_with_* are built
- - Enable compiler optimization
- * debian/control
- - Move libgenometools0 package into libs section
- - Switch pango deps to new package
- - Add ruby builddep, required for the testsuite
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Wed, 06 Nov 2013 14:28:41 +0100
-
-genometools (1.5.1-2) unstable; urgency=low
-
- * debian/control
- - Add myself to Uploaders
- - cme fix dpkg-control
- - Follow liblua package name transition
- Closes: #728017
- - Remove depends from virtual package python-ctypes which is provided
- by python
- * provide symbols file
-
- -- Andreas Tille <tille at debian.org> Mon, 28 Oct 2013 08:17:04 +0100
-
-genometools (1.5.1-1) unstable; urgency=low
-
- * New upstream release.
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Thu, 07 Mar 2013 14:08:05 +0100
-
-genometools (1.5.0-2) unstable; urgency=low
-
- * Patch manuals not to use includecomment/excludecomment
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Sat, 16 Feb 2013 16:58:11 +0100
-
-genometools (1.5.0-1) unstable; urgency=low
-
- * New upstream release
- * bugfixes and cleanups
- * development tool `gt sain' added to run an induced suffix array sorting
- algorithm
- * the -typecheck option in the `gt gff3` and `gt gff3validator` tools
- now also validates parent (part-of) relationships, see -help output for
- details
- * new option -encseq besides -seqfile(s) and -regionmapping to select a
- encseq index as a sequence source
- * GtBioseq backend switched to GtEncseq
- * GtSeqCol is now an interface, GtEncseqCol added
- * GtRankedList added
- * GtSNPAnnotatorStream and `gt snpper' tool added
- * node sorting code is now aware of MD5 hash presence
- * compatibility with old Pango versions inproved
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Tue, 05 Feb 2013 18:52:22 +0100
-
-genometools (1.4.2-4) unstable; urgency=low
-
- * Remove shlibs.local file
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Tue, 09 Oct 2012 12:24:17 +0200
-
-genometools (1.4.2-3) unstable; urgency=low
-
- * Build with pbuilder to obtain reasonable libc dependency (>= 2.13)
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Tue, 09 Oct 2012 10:04:34 +0200
-
-genometools (1.4.2-2) unstable; urgency=low
-
- * Fixed libpango-dev dependency
- * Updated manpages
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Mon, 08 Oct 2012 07:51:52 +0200
-
-genometools (1.4.2-1) unstable; urgency=low
-
- * New upstream release
- [ Sponsor Steffen Moeller ]
- * Update of policy to 3.9.4
- * Added DMUA flag
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Fri, 05 Oct 2012 15:47:56 +0200
-
-genometools (1.4.1-1) unstable; urgency=low
-
- * Initial release (Closes: #657923)
- * the GFF3 parser now handles children which are defined before their parents
- * many small improvements to the GFF3 parser
-
- -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Mon, 09 Jul 2012 14:10:23 +0100
Copied: trunk/packages/genometools/tags/1.5.5-2/debian/changelog (from rev 19321, trunk/packages/genometools/trunk/debian/changelog)
===================================================================
--- trunk/packages/genometools/tags/1.5.5-2/debian/changelog (rev 0)
+++ trunk/packages/genometools/tags/1.5.5-2/debian/changelog 2015-06-10 11:06:30 UTC (rev 19323)
@@ -0,0 +1,167 @@
+genometools (1.5.5-2) unstable; urgency=low
+
+ * Disable faketime on hurd-i386 to fix FTBFS on that arch.
+
+ -- Sascha Steinbiss <sascha at steinbiss.name> Wed, 10 Jun 2015 10:03:22 +0000
+
+genometools (1.5.5-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Sascha Steinbiss <sascha at steinbiss.name> Sat, 06 Jun 2015 09:49:49 +0000
+
+genometools (1.5.4-2) experimental; urgency=low
+
+ * Work towards reproducibility.
+
+ -- Sascha Steinbiss <sascha at steinbiss.name> Sun, 22 Mar 2015 08:09:07 +0000
+
+genometools (1.5.4-1) experimental; urgency=low
+
+ * New upstream release.
+
+ -- Sascha Steinbiss <sascha at steinbiss.name> Fri, 12 Dec 2014 12:06:42 +0000
+
+genometools (1.5.3-2) unstable; urgency=low
+
+ * Reactivate missing patch.
+
+ -- Sascha Steinbiss <sascha at steinbiss.name> Fri, 05 Sep 2014 14:23:31 +0100
+
+genometools (1.5.3-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Sascha Steinbiss <sascha at steinbiss.name> Wed, 16 Jul 2014 20:32:19 +0100
+
+genometools (1.5.2-4) unstable; urgency=low
+
+ * Incorporate patches addressing type conversion errors (thanks to
+ Michael Tautschnig).
+ Closes: #748305
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Sat, 24 May 2014 18:57:45 +0000
+
+genometools (1.5.2-3) unstable; urgency=low
+
+ * Address building issues on s390x, powerpc and armhf
+ * Don't use -m64 for arm64 (thanks to Logan Rosen)
+ Closes: #748708
+ * Build-depend on docbook-xsl to fix FTBFS while offline (thanks to
+ Logan Rosen)
+ Closes: #748709
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Mon, 19 May 2014 23:06:34 +0000
+
+genometools (1.5.2-2) unstable; urgency=low
+
+ * Split manuals into separate documents to avoid strange LaTeX build issues.
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Thu, 15 May 2014 23:23:20 +0000
+
+genometools (1.5.2-1) unstable; urgency=low
+
+ * New upstream release.
+ * Remove symbols file because private symbols are exported (next upstream
+ version will properly control exported symbols and a new symbols file
+ will be created and maintained)
+ * Remove manpages from debian directory as they are now autogenerated on
+ build
+ * Fix some missing symbols problems
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Thu, 15 May 2014 10:51:41 +0000
+
+genometools (1.5.1-3) unstable; urgency=low
+
+ * debian/rules
+ - Add basic tests to check whether cairo/pango linking works
+ - Clean up indices created by tests to make repeated builds possible
+ - Make sure bin/examples/sketch_parsed_with_* are built
+ - Enable compiler optimization
+ * debian/control
+ - Move libgenometools0 package into libs section
+ - Switch pango deps to new package
+ - Add ruby builddep, required for the testsuite
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Wed, 06 Nov 2013 14:28:41 +0100
+
+genometools (1.5.1-2) unstable; urgency=low
+
+ * debian/control
+ - Add myself to Uploaders
+ - cme fix dpkg-control
+ - Follow liblua package name transition
+ Closes: #728017
+ - Remove depends from virtual package python-ctypes which is provided
+ by python
+ * provide symbols file
+
+ -- Andreas Tille <tille at debian.org> Mon, 28 Oct 2013 08:17:04 +0100
+
+genometools (1.5.1-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Thu, 07 Mar 2013 14:08:05 +0100
+
+genometools (1.5.0-2) unstable; urgency=low
+
+ * Patch manuals not to use includecomment/excludecomment
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Sat, 16 Feb 2013 16:58:11 +0100
+
+genometools (1.5.0-1) unstable; urgency=low
+
+ * New upstream release
+ * bugfixes and cleanups
+ * development tool `gt sain' added to run an induced suffix array sorting
+ algorithm
+ * the -typecheck option in the `gt gff3` and `gt gff3validator` tools
+ now also validates parent (part-of) relationships, see -help output for
+ details
+ * new option -encseq besides -seqfile(s) and -regionmapping to select a
+ encseq index as a sequence source
+ * GtBioseq backend switched to GtEncseq
+ * GtSeqCol is now an interface, GtEncseqCol added
+ * GtRankedList added
+ * GtSNPAnnotatorStream and `gt snpper' tool added
+ * node sorting code is now aware of MD5 hash presence
+ * compatibility with old Pango versions inproved
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Tue, 05 Feb 2013 18:52:22 +0100
+
+genometools (1.4.2-4) unstable; urgency=low
+
+ * Remove shlibs.local file
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Tue, 09 Oct 2012 12:24:17 +0200
+
+genometools (1.4.2-3) unstable; urgency=low
+
+ * Build with pbuilder to obtain reasonable libc dependency (>= 2.13)
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Tue, 09 Oct 2012 10:04:34 +0200
+
+genometools (1.4.2-2) unstable; urgency=low
+
+ * Fixed libpango-dev dependency
+ * Updated manpages
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Mon, 08 Oct 2012 07:51:52 +0200
+
+genometools (1.4.2-1) unstable; urgency=low
+
+ * New upstream release
+ [ Sponsor Steffen Moeller ]
+ * Update of policy to 3.9.4
+ * Added DMUA flag
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Fri, 05 Oct 2012 15:47:56 +0200
+
+genometools (1.4.1-1) unstable; urgency=low
+
+ * Initial release (Closes: #657923)
+ * the GFF3 parser now handles children which are defined before their parents
+ * many small improvements to the GFF3 parser
+
+ -- Sascha Steinbiss <steinbiss at zbh.uni-hamburg.de> Mon, 09 Jul 2012 14:10:23 +0100
Deleted: trunk/packages/genometools/tags/1.5.5-2/debian/rules
===================================================================
--- trunk/packages/genometools/trunk/debian/rules 2015-06-08 18:56:54 UTC (rev 19320)
+++ trunk/packages/genometools/tags/1.5.5-2/debian/rules 2015-06-10 11:06:30 UTC (rev 19323)
@@ -1,51 +0,0 @@
-#!/usr/bin/make -f
-# -*- makefile -*-
-
-#export DH_VERBOSE=1
-export DESTDIR=$(CURDIR)/debian/tmp
-export DH_ALWAYS_EXCLUDE=.gitignore
-
-BITS:=$(shell dpkg-architecture | grep DEB_BUILD_ARCH_BITS | cut -f 2 -d'=')
-ifeq ($(BITS),64)
- 64BIT:=yes
-else
- 64BIT:=no
-endif
-
-%:
- dh $@ --parallel --with python2
-
-override_dh_auto_clean:
- $(MAKE) cleanup
- cd doc/manuals; make cleanup
- # should be deleted inside doc/manuals/Makefile
- rm -f doc/manuals/annotationsketch.out \
- doc/manuals/api_reference.tex \
- doc/manuals/gtscript_reference.tex
- find doc . -name "*.toc" -delete
- find testdata \( -name '*.ois' -or -name '*.sds' -or -name '*.esq' -or \
- -name '*.ssp' -or -name '*.des' -or -name "*.md5" \) -and \( -not \
- -name '*foo.32.*' -not -name '*foo.64.*' \) -delete
- rm -f www/genometools.org/htdocs/images/callbacks.png \
- www/genometools.org/htdocs/images/parsed.png \
- www/genometools.org/htdocs/images/constructed.png \
- doc/manuals/annotationsketch.pdf
- rm -f www/genometools.org/htdocs/docs.html \
- www/genometools.org/htdocs/examples.html \
- www/genometools.org/htdocs/libgenometools.html \
- www/genometools.org/htdocs/tools/gt.html
- rm -rf gtpython/build
-
-override_dh_auto_build:
- faketime "`dpkg-parsechangelog -S date`" dh_auto_build --parallel -- useshared=yes 64bit=$(64BIT) errorcheck=no all docs manuals
-
-override_dh_auto_test:
- bin/gt -test
- cd testsuite; ./testsuite.rb -keywords 'gt_sketch and not gt_python and not gt_ruby' -threads 3
-
-override_dh_auto_install:
- dh_auto_install -- installmanpages useshared=yes 64bit=$(64BIT) opt=no errorcheck=no prefix=$(DESTDIR)/usr
- dh_auto_install --sourcedirectory=gtpython --destdir=$(CURDIR)/debian/python-genometools
-
-override_dh_strip:
- dh_strip --dbg-package=genometools-dbg
Copied: trunk/packages/genometools/tags/1.5.5-2/debian/rules (from rev 19322, trunk/packages/genometools/trunk/debian/rules)
===================================================================
--- trunk/packages/genometools/tags/1.5.5-2/debian/rules (rev 0)
+++ trunk/packages/genometools/tags/1.5.5-2/debian/rules 2015-06-10 11:06:30 UTC (rev 19323)
@@ -0,0 +1,55 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+
+#export DH_VERBOSE=1
+export DESTDIR=$(CURDIR)/debian/tmp
+export DH_ALWAYS_EXCLUDE=.gitignore
+
+BITS:=$(shell dpkg-architecture | grep DEB_BUILD_ARCH_BITS | cut -f 2 -d'=')
+ifeq ($(BITS),64)
+ 64BIT:=yes
+else
+ 64BIT:=no
+endif
+# check whether faketime can be used
+ifeq ($(shell faketime 'last friday' date > /dev/null 2> /dev/null; echo $$?),0)
+ FAKETIME:=faketime "`dpkg-parsechangelog -S date`"
+endif
+
+%:
+ dh $@ --parallel --with python2
+
+override_dh_auto_clean:
+ $(MAKE) cleanup
+ cd doc/manuals; make cleanup
+ # should be deleted inside doc/manuals/Makefile
+ rm -f doc/manuals/annotationsketch.out \
+ doc/manuals/api_reference.tex \
+ doc/manuals/gtscript_reference.tex
+ find doc . -name "*.toc" -delete
+ find testdata \( -name '*.ois' -or -name '*.sds' -or -name '*.esq' -or \
+ -name '*.ssp' -or -name '*.des' -or -name "*.md5" \) -and \( -not \
+ -name '*foo.32.*' -not -name '*foo.64.*' \) -delete
+ rm -f www/genometools.org/htdocs/images/callbacks.png \
+ www/genometools.org/htdocs/images/parsed.png \
+ www/genometools.org/htdocs/images/constructed.png \
+ doc/manuals/annotationsketch.pdf
+ rm -f www/genometools.org/htdocs/docs.html \
+ www/genometools.org/htdocs/examples.html \
+ www/genometools.org/htdocs/libgenometools.html \
+ www/genometools.org/htdocs/tools/gt.html
+ rm -rf gtpython/build
+
+override_dh_auto_build:
+ $(FAKETIME) dh_auto_build --parallel -- useshared=yes 64bit=$(64BIT) errorcheck=no all docs manuals
+
+override_dh_auto_test:
+ bin/gt -test
+ cd testsuite; ./testsuite.rb -keywords 'gt_sketch and not gt_python and not gt_ruby' -threads 3
+
+override_dh_auto_install:
+ dh_auto_install -- installmanpages useshared=yes 64bit=$(64BIT) opt=no errorcheck=no prefix=$(DESTDIR)/usr
+ dh_auto_install --sourcedirectory=gtpython --destdir=$(CURDIR)/debian/python-genometools
+
+override_dh_strip:
+ dh_strip --dbg-package=genometools-dbg
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