[med-svn] [tophat] branch upstream updated (b04eb82 -> 6f808e1)

[Alex Mestiashvili]

This is an automated email from the git hooks/post-receive script.

malex-guest pushed a change to branch upstream
in repository tophat.

      from  b04eb82   Imported Upstream version 2.0.13+dfsg
       new  6f808e1   Imported Upstream version 2.0.14+dfsg

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 Makefile.in            |   493 ++-
 aclocal.m4             |   812 ++--
 ar-lib                 |   270 ++
 config.h.in            |    10 +-
 configure              | 10208 +++++++++++++++++++++++------------------------
 configure.ac           |    10 +-
 src/Makefile.am        |    24 +-
 src/Makefile.in        |   524 ++-
 src/bam_merge_impl.cpp |    29 +-
 src/common.cpp         |    12 +
 src/reads.cpp          |    26 +-
 src/reads.h            |   129 +-
 src/tophat-fusion-post |     2 +-
 src/tophat.py          |    15 +-
 src/tophat_reports.cpp |    37 +-
 15 files changed, 6596 insertions(+), 6005 deletions(-)
 create mode 100755 ar-lib

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/tophat.git