[med-svn] [r-bioc-ebseq] branch master updated (5881c19 -> 99eb1c2)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch master
in repository r-bioc-ebseq.

      from  5881c19   Fix upstream/metadata syntax
       new  47092e0   New upstream version
       new  e29ba01   Imported Upstream version 1.10.0
       new  2980d09   Merge tag 'upstream/1.10.0'
       new  ae20873   Add autopkgtest
       new  6e788f1   Upload to unstable
       new  99eb1c2   Mention autopkgtest in changelog

The 6 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 DESCRIPTION                  |  12 +--
 NAMESPACE                    |   4 +-
 NEWS                         |  52 ++++++++++++-
 R/EBMultiTest.R              |  16 ++--
 R/EBTest.R                   |  11 ++-
 R/GetDEResults.R             |  76 +++++++++++++++++++
 R/MedianNorm.R               |  18 ++++-
 R/PlotPostVsRawFC.R          |   2 +-
 README.md                    | 126 ++++++++++++++++++++++++++++++++
 build/vignette.rds           | Bin 199 -> 203 bytes
 debian/README.test           |   8 ++
 debian/changelog             |   6 +-
 debian/control               |  10 ++-
 debian/docs                  |   2 +
 debian/examples              |   1 +
 debian/tests/control         |   5 ++
 debian/tests/run-unit-test   |  19 +++++
 debian/watch                 |   2 +-
 demo/EBSeq.R                 |  28 ++-----
 inst/doc/EBSeq_Vignette.R    | 142 +++++++++++++++++-------------------
 inst/doc/EBSeq_Vignette.Rnw  | 169 +++++++++++++++++++++++++++++++++----------
 inst/doc/EBSeq_Vignette.pdf  | Bin 958612 -> 946690 bytes
 man/EBMultiTest.Rd           |   6 +-
 man/EBTest.Rd                |   7 +-
 man/GetDEResults.Rd          | 104 ++++++++++++++++++++++++++
 man/MedianNorm.Rd            |   3 +-
 vignettes/EBSeq_Vignette.Rnw | 169 +++++++++++++++++++++++++++++++++----------
 27 files changed, 787 insertions(+), 211 deletions(-)
 create mode 100644 R/GetDEResults.R
 create mode 100644 README.md
 create mode 100644 debian/README.test
 create mode 100644 debian/docs
 create mode 100644 debian/examples
 create mode 100644 debian/tests/control
 create mode 100644 debian/tests/run-unit-test
 create mode 100644 man/GetDEResults.Rd

-- 
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