[med-svn] [r-bioc-ebseq] branch upstream updated (c84595b -> e29ba01)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch upstream
in repository r-bioc-ebseq.

      from  c84595b   Imported Upstream version 1.6.0
       new  e29ba01   Imported Upstream version 1.10.0

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 DESCRIPTION                  |  12 +--
 NAMESPACE                    |   4 +-
 NEWS                         |  52 ++++++++++++-
 R/EBMultiTest.R              |  16 ++--
 R/EBTest.R                   |  11 ++-
 R/GetDEResults.R             |  76 +++++++++++++++++++
 R/MedianNorm.R               |  18 ++++-
 R/PlotPostVsRawFC.R          |   2 +-
 README.md                    | 126 ++++++++++++++++++++++++++++++++
 build/vignette.rds           | Bin 199 -> 203 bytes
 demo/EBSeq.R                 |  28 ++-----
 inst/doc/EBSeq_Vignette.R    | 142 +++++++++++++++++-------------------
 inst/doc/EBSeq_Vignette.Rnw  | 169 +++++++++++++++++++++++++++++++++----------
 inst/doc/EBSeq_Vignette.pdf  | Bin 958612 -> 946690 bytes
 man/EBMultiTest.Rd           |   6 +-
 man/EBTest.Rd                |   7 +-
 man/GetDEResults.Rd          | 104 ++++++++++++++++++++++++++
 man/MedianNorm.Rd            |   3 +-
 vignettes/EBSeq_Vignette.Rnw | 169 +++++++++++++++++++++++++++++++++----------
 19 files changed, 740 insertions(+), 205 deletions(-)
 create mode 100644 R/GetDEResults.R
 create mode 100644 README.md
 create mode 100644 man/GetDEResults.Rd

-- 
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