[med-svn] r20545 - trunk/packages/tree-puzzle/trunk/debian/patches

[Andreas Tille]

Author: tille
Date: 2015-11-25 12:40:07 +0000 (Wed, 25 Nov 2015)
New Revision: 20545

Added:
   trunk/packages/tree-puzzle/trunk/debian/patches/patch_test_results.patch
Log:
Injext a patch that would enable passing the first test that failed - but changing the comparison data is something to discuss with upstream.  So the patch is not applied.


Added: trunk/packages/tree-puzzle/trunk/debian/patches/patch_test_results.patch
===================================================================
--- trunk/packages/tree-puzzle/trunk/debian/patches/patch_test_results.patch	                        (rev 0)
+++ trunk/packages/tree-puzzle/trunk/debian/patches/patch_test_results.patch	2015-11-25 12:40:07 UTC (rev 20545)
@@ -0,0 +1,31 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Wed, 25 Nov 2015 13:10:19 +0100
+Description: Some research was done why basically all tests are
+ failing.  It turned out that the results used for comparison
+ really diverge from the actuall results.  This patch might
+ solve the may be simplest diversion - others are way more complex.
+ .
+ This needs to be discussed with upstream!
+ .
+ This patch is not actually used in the packaging just provided
+ here as an example for potential problems.
+ .
+ To check single patches by calling the scripts in dir tests
+ make sure you call these by
+ .
+     VERSION=5.2 ./<scriptname>
+ .
+ Otherwise you will simply get an sed error.
+
+--- a/tests/check-qp-pure-bin
++++ b/tests/check-qp-pure-bin
+@@ -168,8 +168,8 @@ trees that have been generated in the 10
+ Bipartitions included in the quartet puzzling tree:
+ (bipartition with sequences in input order : number of times seen)
+ 
+- *..**  :  1000
+  *...*  :  1000
++ *..**  :  1000
+ 
+ Congruent bipartitions occurred in 50% or less, not included in 
+ the consensus tree: