[med-svn] [python-mne] 363/376: FIX : fix svd without full_matrices=False
Yaroslav Halchenko
debian at onerussian.com
Fri Nov 27 17:23:22 UTC 2015
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yoh pushed a commit to annotated tag v0.1
in repository python-mne.
commit eff54af68f4038b3368cde010e14bceb50bdf728
Author: Alexandre Gramfort <alexandre.gramfort at inria.fr>
Date: Fri Sep 16 21:50:35 2011 -0400
FIX : fix svd without full_matrices=False
---
examples/time_frequency/plot_source_label_time_frequency.py | 3 ++-
mne/minimum_norm/time_frequency.py | 2 +-
2 files changed, 3 insertions(+), 2 deletions(-)
diff --git a/examples/time_frequency/plot_source_label_time_frequency.py b/examples/time_frequency/plot_source_label_time_frequency.py
index 17621d4..673711f 100644
--- a/examples/time_frequency/plot_source_label_time_frequency.py
+++ b/examples/time_frequency/plot_source_label_time_frequency.py
@@ -4,7 +4,8 @@ Compute power and phase lock in label of the source space
=========================================================
Returns time-frequency maps of induced power and phase lock
-in the source space. The inverse method is linear based on dSPM inverse operator.
+in the source space. The inverse method is linear based on dSPM inverse
+operator.
"""
# Authors: Alexandre Gramfort <gramfort at nmr.mgh.harvard.edu>
diff --git a/mne/minimum_norm/time_frequency.py b/mne/minimum_norm/time_frequency.py
index b596046..5d38a8a 100644
--- a/mne/minimum_norm/time_frequency.py
+++ b/mne/minimum_norm/time_frequency.py
@@ -190,7 +190,7 @@ def _source_induced_power(epochs, inverse_operator, frequencies, label=None,
K, noise_norm, lh_vertno, rh_vertno = _assemble_kernel(inv, label, dSPM)
if pca:
- U, s, Vh = linalg.svd(K)
+ U, s, Vh = linalg.svd(K, full_matrices=False)
rank = np.sum(s > 1e-8 * s[0])
K = s[:rank] * U[:, :rank]
Vh = Vh[:rank]
--
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