[med-svn] [python-mne] 246/353: verbose flag defaults to True np.abs now properly called in mne/fiff/raw.py
Yaroslav Halchenko
debian at onerussian.com
Fri Nov 27 17:25:08 UTC 2015
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yoh pushed a commit to tag 0.4
in repository python-mne.
commit 6d40f6d47efc3f6eca44703a55c78ff991222c9f
Author: = <louist87 at gmail.com>
Date: Mon Jul 9 16:57:42 2012 +0200
verbose flag defaults to True
np.abs now properly called in mne/fiff/raw.py
---
mne/event.py | 9 +++++----
mne/fiff/raw.py | 5 +++--
2 files changed, 8 insertions(+), 6 deletions(-)
diff --git a/mne/event.py b/mne/event.py
index 0a87117..cf58c36 100644
--- a/mne/event.py
+++ b/mne/event.py
@@ -130,7 +130,7 @@ def write_events(filename, event_list):
end_file(fid)
-def find_events(raw, stim_channel='STI 014', verbose=False):
+def find_events(raw, stim_channel='STI 014', verbose=True):
"""Find events from raw file
Parameters
@@ -155,9 +155,10 @@ def find_events(raw, stim_channel='STI 014', verbose=False):
if len(pick) == 0:
raise ValueError('No stim channel found to extract event triggers.')
data, times = raw[pick, :]
- if np.any(data < 0) and verbose:
- warnings.warn('Trigger channel contains negative values. '
- 'Taking absolute value.')
+ if np.any(data < 0):
+ if verbose:
+ warnings.warn('Trigger channel contains negative values. '
+ 'Taking absolute value.')
data = np.abs(data) # make sure trig channel is positive
data = data.astype(np.int)
idx = np.where(np.all(np.diff(data, axis=1) > 0, axis=0))[0]
diff --git a/mne/fiff/raw.py b/mne/fiff/raw.py
index 389c4f9..fc88a11 100644
--- a/mne/fiff/raw.py
+++ b/mne/fiff/raw.py
@@ -50,7 +50,7 @@ class Raw(object):
List of channels' names
"""
- def __init__(self, fname, allow_maxshield=False, preload=False, verbose=False):
+ def __init__(self, fname, allow_maxshield=False, preload=False, verbose=True):
# Open the file
if verbose:
print 'Opening raw data file %s...' % fname
@@ -646,7 +646,8 @@ class Raw(object):
return self.info['ch_names']
-def read_raw_segment(raw, start=0, stop=None, sel=None, data_buffer=None, verbose=False):
+def read_raw_segment(raw, start=0, stop=None, sel=None, data_buffer=None,
+ verbose=False):
"""Read a chunck of raw data
Parameters
--
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