[med-svn] r20329 - in trunk/packages/R/r-bioc-affyio/trunk/debian: . patches

[Andreas Tille]

Author: tille
Date: 2015-10-29 21:40:37 +0000 (Thu, 29 Oct 2015)
New Revision: 20329

Modified:
   trunk/packages/R/r-bioc-affyio/trunk/debian/changelog
   trunk/packages/R/r-bioc-affyio/trunk/debian/patches/use_debian_packaged_zlib.patch
   trunk/packages/R/r-bioc-affyio/trunk/debian/watch
Log:
New upstream version


Modified: trunk/packages/R/r-bioc-affyio/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-affyio/trunk/debian/changelog	2015-10-29 21:18:39 UTC (rev 20328)
+++ trunk/packages/R/r-bioc-affyio/trunk/debian/changelog	2015-10-29 21:40:37 UTC (rev 20329)
@@ -1,3 +1,9 @@
+r-bioc-affyio (1.40.0-1) unstable; urgency=medium
+
+  * New upstream version
+
+ -- Andreas Tille <tille at debian.org>  Thu, 29 Oct 2015 22:36:23 +0100
+
 r-bioc-affyio (1.36.0-1) unstable; urgency=medium
 
   * New upstream version

Modified: trunk/packages/R/r-bioc-affyio/trunk/debian/patches/use_debian_packaged_zlib.patch
===================================================================
--- trunk/packages/R/r-bioc-affyio/trunk/debian/patches/use_debian_packaged_zlib.patch	2015-10-29 21:18:39 UTC (rev 20328)
+++ trunk/packages/R/r-bioc-affyio/trunk/debian/patches/use_debian_packaged_zlib.patch	2015-10-29 21:40:37 UTC (rev 20329)
@@ -12,7 +12,7 @@
 -Imports: zlibbioc
  Description: Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.
  License: LGPL (>= 2)
- biocViews: Microarray, DataImport, Infrastructure
+ URL: https://github.com/bmbolstad/affyio
 --- a/NAMESPACE
 +++ b/NAMESPACE
 @@ -1,4 +1,3 @@

Modified: trunk/packages/R/r-bioc-affyio/trunk/debian/watch
===================================================================
--- trunk/packages/R/r-bioc-affyio/trunk/debian/watch	2015-10-29 21:18:39 UTC (rev 20328)
+++ trunk/packages/R/r-bioc-affyio/trunk/debian/watch	2015-10-29 21:40:37 UTC (rev 20329)
@@ -1,3 +1,3 @@
 version=3
-opts=downloadurlmangle=s/\.\./packages\/release\/bioc/ \
+opts=downloadurlmangle=s?^(.*)\.\.?http:$1packages/release/bioc? \
  http://www.bioconductor.org/packages/release/bioc/html/affyio.html .*/affyio_([\d\.]+)\.tar\.gz