[med-svn] [trnascan-se] 05/08: Create a separate package for architecture-independent files
Afif Elghraoui
afif-guest at moszumanska.debian.org
Sat Oct 31 05:56:38 UTC 2015
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afif-guest pushed a commit to branch master
in repository trnascan-se.
commit 0b8b894a8363a99307721c13749d75a8f7d7cdb4
Author: Afif Elghraoui <afif at ghraoui.name>
Date: Fri Oct 30 21:53:05 2015 -0700
Create a separate package for architecture-independent files
---
debian/control | 21 ++++++++++++++++++++-
debian/trnascan-se-common.install | 2 ++
debian/trnascan-se.install | 2 ++
3 files changed, 24 insertions(+), 1 deletion(-)
diff --git a/debian/control b/debian/control
index 993bd06..00f8e36 100644
--- a/debian/control
+++ b/debian/control
@@ -14,7 +14,8 @@ Architecture: any
Depends:
${shlibs:Depends},
${misc:Depends},
- ${perl:Depends}
+ ${perl:Depends},
+ trnascan-se-common (= ${source:Version})
Description: detection of transfer RNA genes in genomic sequence
tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence while
giving less than one false positive per 15 gigabases. Two previously described
@@ -25,3 +26,21 @@ Description: detection of transfer RNA genes in genomic sequence
stochastic context-free grammars. tRNAscan-SE searches at ~ 30 000 bp/s.
Additional extensions to tRNAscan-SE detect unusual tRNA homologues such as
selenocysteine tRNAs, tRNA-derived repetitive elements and tRNA pseudogenes.
+
+Package: trnascan-se-common
+Architecture: all
+Depends:
+ ${misc:Depends},
+ ${perl:Depends}
+Description: detection of transfer RNA genes in genomic sequence (common files)
+ tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence while
+ giving less than one false positive per 15 gigabases. Two previously described
+ tRNA detection programs are used as fast, first-pass prefilters to identify
+ candidate tRNAs, which are then analyzed by a highly selective tRNA covariance
+ model. This work represents a practical application of RNA covariance models,
+ which are general, probabilistic secondary structure profiles based on
+ stochastic context-free grammars. tRNAscan-SE searches at ~ 30 000 bp/s.
+ Additional extensions to tRNAscan-SE detect unusual tRNA homologues such as
+ selenocysteine tRNAs, tRNA-derived repetitive elements and tRNA pseudogenes.
+ .
+ This package contains the architecture-independent common files.
diff --git a/debian/trnascan-se-common.install b/debian/trnascan-se-common.install
new file mode 100644
index 0000000..c2e38ab
--- /dev/null
+++ b/debian/trnascan-se-common.install
@@ -0,0 +1,2 @@
+debian/tmp/usr/share/tRNAscan-SE usr/share
+debian/tmp/usr/share/perl5 usr/share
diff --git a/debian/trnascan-se.install b/debian/trnascan-se.install
new file mode 100644
index 0000000..0a69174
--- /dev/null
+++ b/debian/trnascan-se.install
@@ -0,0 +1,2 @@
+debian/tmp/usr/bin usr
+debian/tmp/usr/share/man usr/share
--
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