[med-svn] r20374 - trunk/packages/R/r-bioc-genomicalignments/trunk/debian
Andreas Tille
tille at moszumanska.debian.org
Sat Oct 31 21:51:43 UTC 2015
Author: tille
Date: 2015-10-31 21:51:42 +0000 (Sat, 31 Oct 2015)
New Revision: 20374
Modified:
trunk/packages/R/r-bioc-genomicalignments/trunk/debian/changelog
trunk/packages/R/r-bioc-genomicalignments/trunk/debian/control
trunk/packages/R/r-bioc-genomicalignments/trunk/debian/watch
Log:
New version with new (Build-)Depends r-bioc-summarizedexperiment
Modified: trunk/packages/R/r-bioc-genomicalignments/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-genomicalignments/trunk/debian/changelog 2015-10-31 21:44:39 UTC (rev 20373)
+++ trunk/packages/R/r-bioc-genomicalignments/trunk/debian/changelog 2015-10-31 21:51:42 UTC (rev 20374)
@@ -1,3 +1,11 @@
+r-bioc-genomicalignments (1.6.1-1) unstable; urgency=medium
+
+ * New upstream version
+ Closes: #803479
+ * Add new (Build-)Depends: r-bioc-summarizedexperiment
+
+ -- Andreas Tille <tille at debian.org> Sat, 31 Oct 2015 19:33:11 +0100
+
r-bioc-genomicalignments (1.4.1-1) unstable; urgency=medium
* New upstream version
Modified: trunk/packages/R/r-bioc-genomicalignments/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-genomicalignments/trunk/debian/control 2015-10-31 21:44:39 UTC (rev 20373)
+++ trunk/packages/R/r-bioc-genomicalignments/trunk/debian/control 2015-10-31 21:51:42 UTC (rev 20374)
@@ -6,8 +6,8 @@
Build-Depends: debhelper (>= 9),
cdbs,
r-base-dev,
- r-bioc-rsamtools (>= 1.20.4),
- r-bioc-biocparallel (>= 1.0.0)
+ r-bioc-rsamtools (>= 1.22.0),
+ r-bioc-summarizedexperiment
Standards-Version: 3.9.6
Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-genomicalignments/trunk/
Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-genomicalignments/trunk/
@@ -18,8 +18,8 @@
Depends: ${R:Depends},
${misc:Depends},
${shlibs:Depends},
- r-bioc-rsamtools (>= 1.20.4),
- r-bioc-biocparallel (>= 1.0.0)
+ r-bioc-rsamtools (>= 1.22.0),
+ r-bioc-summarizedexperiment
Recommends: r-bioc-shortread
Description: BioConductor representation and manipulation of short genomic alignments
This BioConductor package provides efficient containers for storing and
Modified: trunk/packages/R/r-bioc-genomicalignments/trunk/debian/watch
===================================================================
--- trunk/packages/R/r-bioc-genomicalignments/trunk/debian/watch 2015-10-31 21:44:39 UTC (rev 20373)
+++ trunk/packages/R/r-bioc-genomicalignments/trunk/debian/watch 2015-10-31 21:51:42 UTC (rev 20374)
@@ -1,3 +1,3 @@
version=3
-opts=downloadurlmangle=s/\.\./packages\/release\/bioc/ \
+opts=downloadurlmangle=s?^(.*)\.\.?http:$1packages/release/bioc? \
http://www.bioconductor.org/packages/release/bioc/html/GenomicAlignments.html .*/GenomicAlignments_([\d\.]+)\.tar\.gz
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