[med-svn] [python-cobra] branch debian/jessie-backports updated (992446c -> da2cba3)

[Afif Elghraoui]

This is an automated email from the git hooks/post-receive script.

afif-guest pushed a change to branch debian/jessie-backports
in repository python-cobra.

      from  992446c   Prepare backport release
      adds  4677731   Imported Upstream version 0.4.0b3
      adds  0146c8f   Merge tag 'upstream/0.4.0b3'
      adds  ab62cd4   Remove patch that was applied upstream
      adds  0f4a3a3   Adjust autopkgtest commands
      adds  965573a   Refresh patch
      adds  b007f57   Add changelog entry
       new  e1c0101   Merge branch 'master' into debian/jessie-backports
       new  da2cba3   Prepare backports release

The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 .travis.yml                                     | 25 ++++++--
 INSTALL.md                                      | 33 ++++++-----
 README.md                                       |  5 ++
 cobra/VERSION                                   |  2 +-
 cobra/flux_analysis/deletion_worker.py          |  2 +-
 cobra/flux_analysis/phenotype_phase_plane.py    | 26 ++++-----
 cobra/io/__init__.py                            | 27 ++++-----
 cobra/io/mat.py                                 |  3 +-
 cobra/solvers/cglpk.pyx                         | 76 +++++++++++++------------
 cobra/test/__init__.py                          |  5 +-
 cobra/test/flux_analysis.py                     |  9 +++
 debian/changelog                                | 15 +++++
 debian/patches/series                           |  1 -
 debian/patches/test-suite-return-code.patch     | 24 --------
 debian/patches/testsuite-check-jsonschema.patch |  2 +-
 debian/tests/control                            |  4 +-
 setup.py                                        | 12 +++-
 17 files changed, 147 insertions(+), 124 deletions(-)
 delete mode 100644 debian/patches/test-suite-return-code.patch

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/python-cobra.git