[med-svn] [python-pbalign] 06/07: Merge branch 'topic/autogenerate-manpages'

[Afif Elghraoui]

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afif-guest pushed a commit to branch master
in repository python-pbalign.

commit ccf420e96b5a479507ab4894cff649ca8bba78f2
Merge: 48b2a16 fe98243
Author: Afif Elghraoui <afif at ghraoui.name>
Date:   Sat Sep 5 01:13:48 2015 -0700

    Merge branch 'topic/autogenerate-manpages'
    
    Conflicts:
    	debian/rules

 debian/control |  5 ++++-
 debian/rules   | 16 ++++++++++++++--
 2 files changed, 18 insertions(+), 3 deletions(-)

diff --cc debian/rules
index 6216383,249057d..c5c2619
--- a/debian/rules
+++ b/debian/rules
@@@ -5,19 -5,20 +5,31 @@@
  DPKG_EXPORT_BUILDFLAGS = 1
  include /usr/share/dpkg/default.mk
  
- BINDIR=$(CURDIR)/debian/$(DEB_SOURCE)/usr/bin
- 
  export PYBUILD_NAME = pbalign
  
+ BUILDDIR = $(CURDIR)/debian/$(DEB_SOURCE)
++BINDIR=$(CURDIR)/debian/$(DEB_SOURCE)/usr/bin
+ HELP2MAN = help2man --no-info --version-string $(DEB_VERSION_UPSTREAM)
+ MANDIR = $(BUILDDIR)/usr/share/man/man1
+ 
  %:
  	LC_ALL=C.UTF-8 dh $@ --with=python2 --buildsystem=pybuild
  
 -override_dh_auto_install:
 -	dh_auto_install
 +override_dh_install:
 +	dh_install
++	# Create manpages
+ 	mkdir -p $(MANDIR)
+ 	export PYTHONPATH=$(BUILDDIR)/usr/lib/python2.7/dist-packages;	    \
+ 	for executable in $(BUILDDIR)/usr/bin/*;			    \
+ 	do								    \
+ 	    $(HELP2MAN) $$executable > $(MANDIR)/`basename $$executable.1`; \
+ 	done
++	# Remove .py suffix from scripts (we'll make symlinks to replace them)
 +	for script in extractUnmappedSubreads			\
 +	              loadChemistry				\
 +	              createChemistryHeader			\
 +	              maskAlignedReads;				\
 +	do							\
 +	    mv $(BINDIR)/$$script.py $(BINDIR)/$$script;	\
 +	done
++

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