[med-svn] [subread] 05/06: d/{control, copyright, patches/}: applied wrap-and-sort

Alex Mestiashvili malex-guest at moszumanska.debian.org
Sat Sep 5 11:35:40 UTC 2015


This is an automated email from the git hooks/post-receive script.

malex-guest pushed a commit to branch master
in repository subread.

commit fa0279e26dc51ea9125b4c8fe10f24663775bcbb
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Sat Sep 5 13:02:33 2015 +0200

    d/{control,copyright,patches/}: applied wrap-and-sort
---
 debian/control                  | 22 ++++++++++------------
 debian/copyright                |  2 +-
 debian/patches/fix_syntax.patch |  3 +--
 3 files changed, 12 insertions(+), 15 deletions(-)

diff --git a/debian/control b/debian/control
index ddbb62a..f524cca 100644
--- a/debian/control
+++ b/debian/control
@@ -6,10 +6,10 @@ Section: science
 Testsuite: autopkgtest
 Priority: optional
 Build-Depends: debhelper (>= 9),
-               zlib1g-dev,
                help2man,
-               texlive-latex-extra,
                texlive-bibtex-extra,
+               texlive-latex-extra,
+               zlib1g-dev
 Standards-Version: 3.9.6
 Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/subread.git
 Vcs-Git: git://anonscm.debian.org/debian-med/subread.git
@@ -17,22 +17,20 @@ Homepage: http://sourceforge.net/projects/subread/
 
 Package: subread
 Architecture: amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mipsel ppc64el
-Depends: ${shlibs:Depends},
-         ${misc:Depends}
+Depends: ${misc:Depends}, ${shlibs:Depends}
 Description: toolkit for processing next-gen sequencing data
  Subread aligner can be used to align both gDNA-seq and RNA-seq reads.
- Subjunc aligner was specified designed for the detection of exon-exon 
- junction. For the mapping of RNA-seq reads, Subread performs local 
- alignments and Subjunc performs global alignments. 
+ Subjunc aligner was specified designed for the detection of exon-exon
+ junction. For the mapping of RNA-seq reads, Subread performs local
+ alignments and Subjunc performs global alignments.
 
 Package: subread-data
 Architecture: all
-Depends: ${shlibs:Depends},
-         ${misc:Depends}
+Depends: ${misc:Depends}, ${shlibs:Depends}
 Description: data files for subread package
  This package provides data files from the original tarball:
-  - annotation: Directory including NCBI RefSeq gene annotations for 
+  - annotation: Directory including NCBI RefSeq gene annotations for
  genomes 'hg19', 'mm10' and 'mm9'. Each row is an exon.
- Entrez gene identifiers and chromosomal coordinates are provided for 
+ Entrez gene identifiers and chromosomal coordinates are provided for
  each exon.
-  - test: Directory including test data and scripts. 
+  - test: Directory including test data and scripts.
diff --git a/debian/copyright b/debian/copyright
index e07074a..ab76481 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -1,6 +1,6 @@
 Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: subread
-Source: http://sourceforge.net/projects/subread/files/ 
+Source: http://sourceforge.net/projects/subread/files/
 Files-Excluded: doc/*.pdf
 
 Files: *
diff --git a/debian/patches/fix_syntax.patch b/debian/patches/fix_syntax.patch
index 15487c3..5297c76 100644
--- a/debian/patches/fix_syntax.patch
+++ b/debian/patches/fix_syntax.patch
@@ -1,5 +1,4 @@
-Description: Fix spelling errors
-Subject: spelling-error-in-binary subread-buildindex s/sucessfully/successfully/
+Description: spelling-error-in-binary subread-buildindex s/sucessfully/successfully/
 Origin: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 --- subread.orig/src/index-builder.c
 +++ subread/src/index-builder.c

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