[med-svn] [pbalign] 07/09: Add bowtie and gmap as suggested packages

Afif Elghraoui afif-guest at moszumanska.debian.org
Sun Sep 6 09:03:19 UTC 2015


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afif-guest pushed a commit to branch master
in repository pbalign.

commit c6fbadf9daaa0650caad4542c779ec4e335c493d
Author: Afif Elghraoui <afif at ghraoui.name>
Date:   Sun Sep 6 01:39:20 2015 -0700

    Add bowtie and gmap as suggested packages
    
    pbalign can use blasr, bowtie2, or gmap, with blasr as the default.
---
 debian/control | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/debian/control b/debian/control
index 24c95d2..3c827ab 100644
--- a/debian/control
+++ b/debian/control
@@ -25,7 +25,9 @@ Depends: ${misc:Depends},
 	 blasr
 Recommends: python-pbh5tools,
 	    hdf5-tools
-Suggests: python-pbalign-doc
+Suggests: bowtie2,
+	  gmap,
+	  python-pbalign-doc
 Description: map Pacific Biosciences reads to reference DNA sequences
  pbalign aligns PacBio reads to reference sequences, filters aligned
  reads according to user-specific filtering criteria, and converts the

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