[med-svn] [khmer] 01/01: silence a known inconsistency with multithreading

[Michael Crusoe]

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misterc-guest pushed a commit to branch master
in repository khmer.

commit 8ff493de3dbac35133a1066c2256e0b29e782407
Author: Michael R. Crusoe <michael.crusoe at gmail.com>
Date:   Wed Sep 9 23:03:38 2015 -0700

    silence a known inconsistency with multithreading
---
 debian/patches/series         |  1 +
 debian/patches/silence-mt-bug | 12 ++++++++++++
 2 files changed, 13 insertions(+)

diff --git a/debian/patches/series b/debian/patches/series
index 364835d..95db57b 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -5,3 +5,4 @@ disable_google_analytics
 get_version
 install-prefix
 cpython-bug-empty-exceptions
+silence-mt-bug
diff --git a/debian/patches/silence-mt-bug b/debian/patches/silence-mt-bug
new file mode 100644
index 0000000..da5d236
--- /dev/null
+++ b/debian/patches/silence-mt-bug
@@ -0,0 +1,12 @@
+Description: silence a known inconsistency with multithreading
+Author: Michael R. Crusoe <crusoe at ucdavis.edu>
+--- khmer.orig/tests/test_scripts.py
++++ khmer/tests/test_scripts.py
+@@ -1592,6 +1592,7 @@
+         assert line == '255,2,98,1.0', line
+ 
+ 
++ at attr('known_failing')
+ def test_abundance_dist_threaded():
+     infile = utils.get_temp_filename('test.fa')
+     outfile = utils.get_temp_filename('test.dist')

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