[med-svn] [dazzdb] 04/07: Prevent formatting errors in manpages

Afif Elghraoui afif-guest at moszumanska.debian.org
Sun Sep 20 10:20:24 UTC 2015


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afif-guest pushed a commit to branch master
in repository dazzdb.

commit b01be1caedace2886ec7bcafe2932df5defe6129
Author: Afif Elghraoui <afif at ghraoui.name>
Date:   Sun Sep 20 03:07:49 2015 -0700

    Prevent formatting errors in manpages
---
 debian/man/DBdust.1.md   | 2 +-
 debian/man/fasta2DB.1.md | 6 +++---
 2 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/debian/man/DBdust.1.md b/debian/man/DBdust.1.md
index 3f8d957..bb73a79 100644
--- a/debian/man/DBdust.1.md
+++ b/debian/man/DBdust.1.md
@@ -13,7 +13,7 @@ DBdust - description
 # DESCRIPTION
 
 Runs the symmetric DUST algorithm over the reads in the untrimmed DB *path*.db or
-*path*.dam producing a track .*path*.dust[.anno,.data] that marks all intervals of low
+*path*.dam producing a track `.`*path*.dust[.anno,.data] that marks all intervals of low
 complexity sequence, where the scan window is of size **-w**, the threshold for being a
 low-complexity interval is **-t**, and only perfect intervals of size greater than **-m** are
 recorded.  If the **-b** option is set then the definition of low complexity takes into
diff --git a/debian/man/fasta2DB.1.md b/debian/man/fasta2DB.1.md
index c1d8713..1d06db6 100644
--- a/debian/man/fasta2DB.1.md
+++ b/debian/man/fasta2DB.1.md
@@ -13,9 +13,9 @@ fasta2DB - create a Dazzler database from fasta files
 # DESCRIPTION
 
 Builds an initial database, or adds to an existing database, the list of
-.fasta files following the database name argument, or if the **-f** option is
-used, the list of .fasta files in *file*. A given .fasta file can only be
-added once to the DB (this is checked by the command). The .fasta headers must
+`.fasta` files following the database name argument, or if the **-f** option is
+used, the list of `.fasta` files in *file*. A given `.fasta` file can only be
+added once to the DB (this is checked by the command). The `.fasta` headers must
 be in the "Pacbio" format (i.e. the output of the Pacbio tools or our
 **dextract**(1) program) and the well, pulse interval, and read quality are
 extracted from the header and kept with each read record. If the files are

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