[med-svn] samtools 02/03: Revert "Remove source files not present in upstream tarball"

Afif Elghraoui afif-guest at moszumanska.debian.org
Tue Sep 22 13:56:32 UTC 2015


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afif-guest pushed a commit to branch debian/unstable
in repository samtools.

commit 658179c6e1ac91d3f71882f7653f72d3f93c95b9
Author: Afif Elghraoui <afif at ghraoui.name>
Date:   Tue Sep 22 06:41:10 2015 -0700

    Revert "Remove source files not present in upstream tarball"
    
    This reverts commit 702d28926f97b3acb9ce92705cbbe28b41015615.
    
    This does not really cause a major problem.
---
 .travis.yml | 18 ++++++++++++++++++
 README.md   | 13 +++++++++++++
 2 files changed, 31 insertions(+)

diff --git a/.travis.yml b/.travis.yml
new file mode 100644
index 0000000..35dd1d1
--- /dev/null
+++ b/.travis.yml
@@ -0,0 +1,18 @@
+# Control file for continuous integration testing at http://travis-ci.org/
+
+language: c
+compiler:
+  - clang
+  - gcc
+
+matrix:
+  include:
+    # An unoptimised C99 build, for detecting non-static inline functions
+    - compiler: gcc
+      env: CFLAGS="-std=gnu99 -O0"
+
+before_script:
+  - git clone --depth=5 --branch=develop git://github.com/samtools/htslib.git
+  - export HTSDIR=./htslib
+
+script: make -e && make -e test
diff --git a/README.md b/README.md
new file mode 100644
index 0000000..e1f6a6a
--- /dev/null
+++ b/README.md
@@ -0,0 +1,13 @@
+samtools
+========
+
+This is the official development repository for samtools.
+
+The original samtools package has been split into three separate
+but tightly coordinated projects:
+- [htslib](https://github.com/samtools/htslib): C-library for handling high-throughput sequencing data
+- samtools: mpileup and other tools for handling SAM, BAM, CRAM
+- [bcftools](https://github.com/samtools/bcftools): calling and other tools for handling VCF, BCF
+
+See also http://github.com/samtools/
+

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