[med-svn] [libbpp-seq] 04/06: DEP 5

Andreas Tille tille at debian.org
Sat Apr 9 06:28:59 UTC 2016


This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository libbpp-seq.

commit 60620effc83aac8ae70059d013626cee397bd49c
Author: Andreas Tille <tille at debian.org>
Date:   Sat Apr 9 08:20:17 2016 +0200

    DEP 5
---
 debian/changelog |  2 ++
 debian/compat    |  2 +-
 debian/copyright | 94 +++++++++++++++++++++++++++++++-------------------------
 3 files changed, 55 insertions(+), 43 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index 1aee6d8..596695f 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -5,6 +5,8 @@ libbpp-seq (2.2.0-1) UNRELEASED; urgency=medium
   * Better description
   * Team maintenance in Debian Med team
   * Add watch file
+  * debhelper 9
+  * DEP5
 
  -- Andreas Tille <tille at debian.org>  Sat, 09 Apr 2016 07:55:53 +0200
 
diff --git a/debian/compat b/debian/compat
index 7ed6ff8..ec63514 100644
--- a/debian/compat
+++ b/debian/compat
@@ -1 +1 @@
-5
+9
diff --git a/debian/copyright b/debian/copyright
index 1f950f5..5ed32e4 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -1,52 +1,25 @@
-This package was debianized by Julien Dutheil <julien.dutheil at univ-montp2.fr> on
-Thu, 23 Sep 2014 14:00:00 +0100.
-
-It was downloaded from <http://biopp.univ-montp2.fr/Repositories/sources>
-
-Upstream Author: 
-
-    Julien Dutheil <julien.dutheil at univ-montp2.fr>
-
-Copyright: 
-
-    Copyright (C) 2014 Bio++ Development Team
-
-License:
-
-    This package is free software; you can redistribute it and/or modify
-    it under the terms of the GNU General Public License as published by
-    the Free Software Foundation; either version 2 of the License, or
-    (at your option) any later version.
- 
-    This package is distributed in the hope that it will be useful,
-    but WITHOUT ANY WARRANTY; without even the implied warranty of
-    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-    GNU General Public License for more details.
- 
-    You should have received a copy of the GNU General Public License
-    along with this package; if not, write to the Free Software
-    Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
-
-On Debian systems, the complete text of the GNU General
-Public License can be found in `/usr/share/common-licenses/GPL'.
-
-The Debian packaging is (C) 2014, Julien Dutheil <julien.dutheil at univ-montp2.fr> and
-is licensed under the GPL, see above.
-
-The provided software is distributed under the CeCILL license:
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: B++-Seq
+Upstream-Contact: Julien Yann Dutheil <julien.dutheil at univ-montp2.fr>
+Source: http://biopp.univ-montp2.fr/Repositories/sources/
 
+Files: *
+Copyright: 2010-2016 Julien Yann Dutheil <julien.dutheil at univ-montp2.fr>
+License: CeCILL
+ The provided software is distributed under the CeCILL license:
+ .
     This software is governed by the CeCILL license under French law and
     abiding by the rules of distribution of free software.  You can  use, 
     modify and/ or redistribute the software under the terms of the CeCILL
     license as circulated by CEA, CNRS and INRIA at the following URL
     "http://www.cecill.info". 
-
+ .
     As a counterpart to the access to the source code and  rights to copy,
     modify and redistribute granted by the license, users are provided only
     with a limited warranty  and the software's author,  the holder of the
     economic rights,  and the successive licensors  have only  limited
     liability. 
-
+ .
     In this respect, the user's attention is drawn to the risks associated
     with loading,  using,  modifying and/or developing or reproducing the
     software by the user in light of its specific status of free software,
@@ -57,10 +30,47 @@ The provided software is distributed under the CeCILL license:
     requirements in conditions enabling the security of their systems and/or 
     data to be ensured and,  more generally, to use and operate it in the 
     same conditions as regards security. 
-
+ .
     The fact that you are presently reading this means that you have had
     knowledge of the CeCILL license and that you accept its terms.
-    
-The complete text of the license may be found here:
-http://www.cecill.info/licences/Licence_CeCILL_V2-en.html
+ .    
+ The complete text of the license may be found here:
+ http://www.cecill.info/licences/Licence_CeCILL_V2-en.html
+
+Files: debian/*
+Copyright: 2014 Julien Yann Dutheil <julien.dutheil at univ-montp2.fr>
+                Bio++ Development Team
+           2016 Andreas Tille <tille at debian.org>
+License: GPL-2+
+
+Files: src/Bpp/Numeric/Matrix/EigenValue.h
+       src/Bpp/Numeric/Matrix/LUDecomposition.h
+Copyright: 2010 Joe Hicklin, Cleve Moler, Peter Webb (The MathWorks),
+                Ronald F. Boisvert, Bruce Miller, Roldan Pozo, Karin Remingtonand
+                (National Institute of Standards and Technology (NIST))
+License: GPL-2+
+Comment: see http://math.nist.gov/javanumerics/jama
+
+Files: src/Bpp/Numeric/Random/ContingencyTableGenerator.*
+Copyright: 2003 Martin Maechler
+License: GPL-2+
+Comment: adpated from file rcont.c belonging to the R software
+
+License: GPL-2+
+    This package is free software; you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation; either version 2 of the License, or
+    (at your option) any later version.
+ . 
+    This package is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+ .
+    You should have received a copy of the GNU General Public License
+    along with this package; if not, write to the Free Software
+    Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License can be found in `/usr/share/common-licenses/GPL'.
 

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