[med-svn] [maffilter] 02/02: Add example package containing the data from upstream source

Andreas Tille tille at debian.org
Wed Apr 27 12:27:38 UTC 2016


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tille pushed a commit to branch master
in repository maffilter.

commit f67cf4cd52798e561a887571c1215ab114b8ca14
Author: Andreas Tille <tille at debian.org>
Date:   Wed Apr 27 14:17:23 2016 +0200

    Add example package containing the data from upstream source
---
 debian/control                          | 23 +++++++++++++++++++++++
 debian/maffilter-examples.examples      |  1 +
 debian/maffilter.docs                   |  1 +
 debian/{manpages => maffilter.manpages} |  0
 4 files changed, 25 insertions(+)

diff --git a/debian/control b/debian/control
index 637f99d..11024a2 100644
--- a/debian/control
+++ b/debian/control
@@ -20,6 +20,7 @@ Package: maffilter
 Architecture: any
 Depends: ${shlibs:Depends},
          ${misc:Depends}
+Suggests: maffilter-examples
 Description: process genome alignment in the Multiple Alignment Format
  MafFilter applies a series of "filters" to a MAF file, in order to
  clean it, extract data and computer statistics while keeping track of
@@ -35,3 +36,25 @@ Description: process genome alignment in the Multiple Alignment Format
   * It can reconstruct phylogeny/genealogy along the genome alignment.
   * It can compute population genetics statistics, such as site
     frequency spectrum, number of fixed/polymorphic sites, etc.
+
+Package: maffilter-examples
+Architecture: all
+Depends: ${misc:Depends}
+Enhances: maffilter
+Description: process genome alignment in the Multiple Alignment Format (example data)
+ MafFilter applies a series of "filters" to a MAF file, in order to
+ clean it, extract data and computer statistics while keeping track of
+ the associated meta-data such as genome coordinates and quality scores.
+ .
+  * It can process the alignment to remove low-quality / ambiguous /
+    masked regions.
+  * It can export data into a single or multiple alignment file in
+    format such as Fasta or Clustal.
+  * It can read annotation data in GFF or GTF format, and extract the
+    corresponding alignment.
+  * It can perform sliding windows calculations.
+  * It can reconstruct phylogeny/genealogy along the genome alignment.
+  * It can compute population genetics statistics, such as site
+    frequency spectrum, number of fixed/polymorphic sites, etc.
+ .
+ This package provides example data for maffilter.
diff --git a/debian/maffilter-examples.examples b/debian/maffilter-examples.examples
new file mode 100644
index 0000000..e39721e
--- /dev/null
+++ b/debian/maffilter-examples.examples
@@ -0,0 +1 @@
+examples/*
diff --git a/debian/maffilter.docs b/debian/maffilter.docs
new file mode 100644
index 0000000..51473ea
--- /dev/null
+++ b/debian/maffilter.docs
@@ -0,0 +1 @@
+AUTHORS.txt
diff --git a/debian/manpages b/debian/maffilter.manpages
similarity index 100%
rename from debian/manpages
rename to debian/maffilter.manpages

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