[med-svn] [r-bioc-cummerbund] branch upstream updated (e033b3a -> 1498ad5)

[Andreas Tille]

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tille pushed a change to branch upstream
in repository r-bioc-cummerbund.

      from  e033b3a   Imported Upstream version 2.12.0
       new  1498ad5   Imported Upstream version 2.12.1

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
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Summary of changes:
 DESCRIPTION                              |   4 +-
 R/methods-CuffData.R                     | 211 +++++++++++++++----------------
 R/methods-CuffFeatureSet.R               |   2 +-
 R/methods-CuffGene.R                     |   2 +-
 build/vignette.rds                       | Bin 303 -> 302 bytes
 inst/doc/cummeRbund-example-workflow.pdf | Bin 169400 -> 198167 bytes
 inst/doc/cummeRbund-manual.pdf           | Bin 1360978 -> 1567910 bytes
 man/createDB.Rd                          |  36 ++++++
 8 files changed, 145 insertions(+), 110 deletions(-)
 create mode 100644 man/createDB.Rd

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