[med-svn] [prime-phylo] 01/01: fix FTBFS with Boost 1.60

[Sascha Steinbiss]

This is an automated email from the git hooks/post-receive script.

satta pushed a commit to annotated tag debian/1.0.11-4
in repository prime-phylo.

commit a41103b4806598ebc4c652f52d9b7366f6560135
Author: Sascha Steinbiss <satta at debian.org>
Date:   Wed Aug 3 11:21:33 2016 +0000

    fix FTBFS with Boost 1.60
---
 debian/changelog                             |  8 ++++++++
 debian/patches/fix-ftbfs-with-Boost160.patch | 19 +++++++++++++++++++
 debian/patches/series                        |  1 +
 3 files changed, 28 insertions(+)

diff --git a/debian/changelog b/debian/changelog
index 3b2dba3..d226e35 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,11 @@
+prime-phylo (1.0.11-4) unstable; urgency=medium
+
+  * Team upload.
+  * fix FTBFS with Boost 1.60 (Closes: #833334)
+    Thanks to Graham Inggs for the patch.
+
+ -- Sascha Steinbiss <satta at debian.org>  Wed, 03 Aug 2016 11:20:36 +0000
+
 prime-phylo (1.0.11-3) unstable; urgency=medium
 
   * Team upload.
diff --git a/debian/patches/fix-ftbfs-with-Boost160.patch b/debian/patches/fix-ftbfs-with-Boost160.patch
new file mode 100644
index 0000000..7f5dcd4
--- /dev/null
+++ b/debian/patches/fix-ftbfs-with-Boost160.patch
@@ -0,0 +1,19 @@
+Description: Fix FTBFS with Boost 1.60
+ Add serialization/utility include to prevent error:
+ src/cxx/libraries/prime/MpiMCMC.cc:112:33:   required from here
+ /usr/include/boost/serialization/access.hpp:116:9:
+ error: ‘struct std::pair<int, int>’ has no member named ‘serialize’
+ t.serialize(ar, file_version);
+Bug-Debian: https://bugs.debian.org/833334
+Author: Graham Inggs <ginggs at debian.org>
+Last-Update: 2016-08-03
+--- a/src/cxx/libraries/prime/MpiMCMC.hh
++++ b/src/cxx/libraries/prime/MpiMCMC.hh
+@@ -10,6 +10,7 @@
+ 
+ #include <boost/mpi/collectives.hpp>
+ #include <boost/serialization/string.hpp>
++#include <boost/serialization/utility.hpp>
+ #include <boost/mpi/environment.hpp>
+ #include <boost/mpi/communicator.hpp>
+ #include <boost/mpi/nonblocking.hpp>
diff --git a/debian/patches/series b/debian/patches/series
index 3d5f0df..e259e15 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -1 +1,2 @@
 fix-gcc-6.patch
+fix-ftbfs-with-Boost160.patch

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/prime-phylo.git