[med-svn] [vsearch] 02/08: Imported Upstream version 2.0.3

[Sascha Steinbiss]

This is an automated email from the git hooks/post-receive script.

satta pushed a commit to branch master
in repository vsearch.

commit 64c75faf59f348388d03cc753d7ea9d12833846a
Author: Sascha Steinbiss <satta at debian.org>
Date:   Wed Aug 3 17:47:14 2016 +0000

    Imported Upstream version 2.0.3
---
 configure.ac    | 7 ++++++-
 man/vsearch.1   | 6 +++++-
 src/Makefile.am | 2 +-
 3 files changed, 12 insertions(+), 3 deletions(-)

diff --git a/configure.ac b/configure.ac
index 0db8795..5364c38 100644
--- a/configure.ac
+++ b/configure.ac
@@ -2,7 +2,7 @@
 # Process this file with autoconf to produce a configure script.
 
 AC_PREREQ([2.63])
-AC_INIT([vsearch], [2.0.2], [torognes at ifi.uio.no])
+AC_INIT([vsearch], [2.0.3], [torognes at ifi.uio.no])
 AM_INIT_AUTOMAKE([subdir-objects])
 AC_LANG([C++])
 AC_CONFIG_SRCDIR([src/vsearch.cc])
@@ -11,6 +11,11 @@ AC_CONFIG_HEADERS([config.h])
 AC_SUBST(MACOSX_DEPLOYMENT_TARGET)
 MACOSX_DEPLOYMENT_TARGET="10.7"
 
+# Set default gcc and g++ options
+
+CFLAGS='-g'
+CXXFLAGS='-g'
+
 # Checks for programs.
 AC_PROG_CXX
 AC_PROG_RANLIB
diff --git a/man/vsearch.1 b/man/vsearch.1
index f170074..6b0bc15 100644
--- a/man/vsearch.1
+++ b/man/vsearch.1
@@ -1,5 +1,5 @@
 .\" ============================================================================
-.TH vsearch 1 "July 5, 2016" "version 2.0.2" "USER COMMANDS"
+.TH vsearch 1 "August 2, 2016" "version 2.0.3" "USER COMMANDS"
 .\" ============================================================================
 .SH NAME
 vsearch \(em chimera detection, clustering, dereplication and
@@ -2501,6 +2501,10 @@ Avoid segmentation fault when masking very long sequences.
 .TP
 .BR v2.0.2\~ "released July 5, 2016"
 Avoid warnings when compiling with GCC 6.
+.TP
+.BR v2.0.3\~ "released August 2, 2016"
+Fixed bad compiler options resulting in Illegal instruction errors
+when running precompiled binaries.
 .RE
 .LP
 .\" ============================================================================
diff --git a/src/Makefile.am b/src/Makefile.am
index 402a911..7732165 100644
--- a/src/Makefile.am
+++ b/src/Makefile.am
@@ -1,6 +1,6 @@
 bin_PROGRAMS = $(top_builddir)/bin/vsearch
 
-AM_CXXFLAGS=-Wall -Wsign-compare
+AM_CXXFLAGS=-Wall -Wsign-compare -O2 -g
 AM_CFLAGS=$(AM_CXXFLAGS)
 
 export MACOSX_DEPLOYMENT_TARGET

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/vsearch.git