[med-svn] [cd-hit] annotated tag upstream/4.6.5 created (now 924a334)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to annotated tag upstream/4.6.5
in repository cd-hit.

        at  924a334   (tag)
   tagging  9e6ec7b9ff6e934f28d76c21bbbe8304f3ea0878 (commit)
 tagged by  Andreas Tille
        on  Wed Aug 3 22:12:39 2016 +0200

- Log -----------------------------------------------------------------
Upstream version 4.6.5

Andreas Tille (28):
      Create packaging dir for cd-hit (and commit uncommited change of qiime/README.source)
      Commit packaging stuff for cd-hit
      Added ITP bug #, new upstream; waiting for decision about source for documentation
      Added source for documentation; wrote two manpages (more are needed); docbase; upload to unstable
      Document rename of upstream-metadata.yaml
      Fixed watch file
      Forgot to commit this explanation in SVN (it was part of latest source release)
      New upstream version
      Bumped standards-version
      DEP5 verified and fixed (cme fix dpkg-copyright)
      Fix gcc-4.7 build issue
      Enhance citation information
      Debhelper 9; upload to unstable
      New upstream version (patches applied, source for documentation included)
      Make sure hardening flags are propagated
      Use MPI version of cd-hit
      Use help2man in build process to get more manpages; drop manually enhanced previous manpages (the difference is that sections "SEE ALSO" and "AUTHOR" are not specificall marked but we have eight manpages always up to date more)
      New upstream version with adapted patches; cme fix dpkg-control
      anonscm and upload to unstable
      Take over changes from BioLinux and upload
      New upstream version, Adapted d/watch to move from google code to Github
      Remove redundant remark from author about LaTeX source of doc
      cme fix dpkg-control
      Update debian/copyright
      Some tools do not generate a help2man output any more
      New upstream version
      * Remove links to scripts that were removed in this version
      Imported Upstream version 4.6.5

Charles Plessy (3):
      Renamed debian/upstream-metadata.yaml to debian/upstream.
      debian/upstream: Moved DOI and PMID to the Reference namespace.
      Corrected the files that did not validate with YAML::XS.

James McCoy (1):
      Move debian/upstream to debian/upstream/metadata

Thorsten Alteholz (1):
      mergeWithUpstream set automatically

Tim Booth (1):
      A user was asking for cdhit-454, so I went to backport the latest version into

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No new revisions were added by this update.

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