[med-svn] [idba] branch upstream updated (51230b5 -> 1c629ca)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch upstream
in repository idba.

      from  51230b5   Imported Upstream version 1.1.2
       new  1c629ca   Imported Upstream version 1.1.3

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 Makefile.in                      | 323 ++++++++------
 README                           |  77 ----
 aclocal.m4                       | 686 +++++++++++++++++++-----------
 bin/Makefile.in                  | 784 ++++++++++++++++++++--------------
 compile                          | 347 +++++++++++++++
 configure                        | 654 +++++++++++++++++-----------
 configure.ac                     |   4 +-
 lib/Makefile.in                  | 590 +++++++++++++++-----------
 script/Makefile.in               | 110 ++++-
 src/graph/contig_graph.cpp       |  11 +-
 src/graph/contig_graph.h         |   5 +-
 src/graph/hash_graph.h           |   7 +-
 src/misc/log.cpp                 |   7 +-
 src/release/filterfa.cpp         |   2 +-
 src/release/idba_tran.cpp        |   7 +-
 src/sequence/sequence_reader.cpp |   4 +-
 src/sequence/sequence_writer.cpp |   4 +-
 test-driver                      | 139 ++++++
 test/Makefile.am                 |   3 +-
 test/Makefile.in                 | 894 +++++++++++++++++++++++++++++++--------
 20 files changed, 3175 insertions(+), 1483 deletions(-)
 delete mode 100644 README
 create mode 100755 compile
 create mode 100755 test-driver

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