[med-svn] [fast5] 03/12: Merge tag 'upstream/0.5.6'

[Afif Elghraoui]

This is an automated email from the git hooks/post-receive script.

afif pushed a commit to branch master
in repository fast5.

commit c3646688d257ead0a59cd3f34214a1f5dae351fe
Merge: 9ec1ef1 7d9396b
Author: Afif Elghraoui <afif at ghraoui.name>
Date:   Thu Aug 11 18:55:45 2016 -0700

    Merge tag 'upstream/0.5.6'
    
    Upstream version 0.5.6

 .VERSION.in                   |    1 +
 .gitignore                    |    2 +
 .travis.Dockerfile.in         |   37 +
 .travis.yml                   |   19 +
 .version_files                |    2 +
 LICENSE                       |   22 +
 README.md                     |   11 -
 README.org                    |   48 ++
 VERSION                       |    1 +
 python/.gitignore             |    5 +
 python/Makefile               |   35 +
 python/fast5/.version.py.in   |    1 +
 python/fast5/__init__.py      |   10 +
 python/fast5/source/fast5.cpp |  182 ++++
 python/fast5/version.py       |    1 +
 python/setup.py               |   94 ++
 src/.gitignore                |    4 +
 src/Makefile                  |   35 +-
 src/a.cpp                     |   86 --
 src/f5-mod.cpp                |   92 ++
 src/f5dump-full.cpp           |  273 ++++++
 src/f5dump.cpp                |  197 +++++
 src/fast5.hpp                 |  928 ++++++++++++++++----
 src/hdf5-mod.cpp              |  308 +++++++
 src/hdf5_tools.hpp            | 1894 ++++++++++++++++++++++++++++++++---------
 src/tmp.cpp                   |  207 +++++
 26 files changed, 3847 insertions(+), 648 deletions(-)

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/fast5.git