[med-svn] [python-cutadapt] branch upstream updated (250b0dc -> 7782a43)

[Olivier Sallou]

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osallou pushed a change to branch upstream
in repository python-cutadapt.

      from  250b0dc   Imported Upstream version 1.10
       new  7782a43   Imported Upstream version 1.11

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
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Summary of changes:
 CHANGES.rst                            |  138 ++-
 MANIFEST.in                            |   19 +
 PKG-INFO                               |    5 +-
 PKG-INFO => cutadapt.egg-info/PKG-INFO |    5 +-
 cutadapt.egg-info/SOURCES.txt          |  210 ++++
 cutadapt.egg-info/dependency_links.txt |    1 +
 cutadapt.egg-info/top_level.txt        |    1 +
 cutadapt/__init__.py                   |    4 +-
 cutadapt/_seqio.c                      | 2107 ++++++++++----------------------
 cutadapt/_seqio.pyx                    |   16 +-
 cutadapt/_version.py                   |   21 +
 cutadapt/scripts/cutadapt.py           |   78 +-
 cutadapt/seqio.py                      |   32 +-
 doc/conf.py                            |   12 +-
 doc/guide.rst                          |   26 +-
 doc/recipes.rst                        |   32 +-
 setup.cfg                              |   13 +
 setup.py                               |   38 +-
 tests/cut/SRR2040271_1.fastq           |    8 +
 tests/data/SRR2040271_1.fastq          |    8 +
 tests/testpaired.py                    |   88 +-
 tests/tests.py                         |    5 +
 tests/testseqio.py                     |    4 +-
 versioneer.py                          | 1774 +++++++++++++++++++++++++++
 24 files changed, 3005 insertions(+), 1640 deletions(-)
 create mode 100644 MANIFEST.in
 copy PKG-INFO => cutadapt.egg-info/PKG-INFO (85%)
 create mode 100644 cutadapt.egg-info/SOURCES.txt
 create mode 100644 cutadapt.egg-info/dependency_links.txt
 create mode 100644 cutadapt.egg-info/top_level.txt
 create mode 100644 cutadapt/_version.py
 create mode 100644 setup.cfg
 create mode 100644 tests/cut/SRR2040271_1.fastq
 create mode 100644 tests/data/SRR2040271_1.fastq
 create mode 100644 versioneer.py

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