[med-svn] [ngs-sdk] branch upstream updated (97eabb4 -> 62d125b)

[Olivier Sallou]

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osallou pushed a change to branch upstream
in repository ngs-sdk.

      from  97eabb4   Imported Upstream version 1.2.4
       new  62d125b   Imported Upstream version 1.2.5

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 CHANGES                                            |  15 ++
 CHANGES.md                                         |  37 ++--
 ngs-bam/.gitignore                                 |   1 +
 ngs-bam/Makefile                                   |   2 +-
 {ngs-sdk => ngs-bam}/Makefile.install              |  25 +--
 ngs-sdk/language/Makefile => ngs-bam/Makefile.vers |  29 +--
 ngs-bam/setup/konfigure.perl                       | 206 +++++++++++++--------
 ngs-bam/setup/package.prl                          |   1 -
 .../language/Makefile => ngs-java/Makefile.vers    |  29 +--
 ngs-java/gov/nih/nlm/ncbi/ngs/LibDependencies.java |   4 +-
 ngs-java/setup/konfigure.perl                      | 204 ++++++++++++--------
 ngs-java/setup/package.prl                         |   1 -
 ngs-python/.gitignore                              |   1 +
 .../language/Makefile => ngs-python/Makefile.vers  |  29 +--
 ngs-python/setup/konfigure.perl                    | 204 ++++++++++++--------
 ngs-python/setup/package.prl                       |   1 -
 ngs-sdk/.gitignore                                 |   1 +
 ngs-sdk/Makefile                                   |   2 +-
 ngs-sdk/{language/Makefile => Makefile.vers}       |  29 +--
 ngs-sdk/dispatch/version.h                         |   2 +-
 ngs-sdk/language/java/jni_String.cpp               |  10 +-
 ngs-sdk/setup/konfigure.perl                       | 203 ++++++++++++--------
 ngs-sdk/setup/package.prl                          |   1 -
 23 files changed, 571 insertions(+), 466 deletions(-)
 copy {ngs-sdk => ngs-bam}/Makefile.install (86%)
 copy ngs-sdk/language/Makefile => ngs-bam/Makefile.vers (78%)
 copy ngs-sdk/language/Makefile => ngs-java/Makefile.vers (78%)
 copy ngs-sdk/language/Makefile => ngs-python/Makefile.vers (78%)
 copy ngs-sdk/{language/Makefile => Makefile.vers} (78%)

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