[med-svn] [sga] branch upstream updated (592d36b -> 77a121a)

[Afif Elghraoui]

This is an automated email from the git hooks/post-receive script.

afif pushed a change to branch upstream
in repository sga.

      from  592d36b   Imported Upstream version 0.10.14
       new  77a121a   Imported Upstream version 0.10.15

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 Dockerfile                      | 74 +++++++++++++++++++++++++++++++++++++++++
 Dockerfile.testing              | 63 +++++++++++++++++++++++++++++++++++
 src/Bigraph/Bigraph.cpp         |  2 +-
 src/Bigraph/Vertex.h            |  3 +-
 src/SGA/kmer-count.cpp          |  2 +-
 src/SGA/overlap-long.cpp        |  5 +--
 src/SGA/preqc.cpp               |  2 +-
 src/SuffixTools/STCommon.h      |  2 +-
 src/bin/sga-bam2de.pl           |  2 +-
 src/bin/sga-preqc-report.py     |  2 +-
 src/configure.ac                |  6 ++--
 src/examples/sga-ecoli-miseq.sh |  3 +-
 12 files changed, 152 insertions(+), 14 deletions(-)
 create mode 100644 Dockerfile
 create mode 100644 Dockerfile.testing

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/sga.git