[med-svn] [fast5] branch debian/jessie-backports updated (1596a80 -> c8b1d29)

[Afif Elghraoui]

This is an automated email from the git hooks/post-receive script.

afif pushed a change to branch debian/jessie-backports
in repository fast5.

      from  1596a80   fast5 (0~20150918-1~bpo8+1) jessie-backports; urgency=medium
      adds  9ec1ef1   Populate watch file
      adds  7d9396b   Imported Upstream version 0.5.6
      adds  c364668   Merge tag 'upstream/0.5.6'
      adds  4230e20   Update copyright years and email address
      adds  328814a   Change section to science
      adds  eb4bec1   Bump Standards-Version to 3.9.8
      adds  7de7fbb   Use encrypted protocols for VCS URLs
      adds  779b72b   Remove obsolete autopkgtest
      adds  0d060a6   Update patches
      adds  c490cde   Update name of README
      adds  04c709f   Remove obsolete examples
      adds  7c090de   releasing package fast5 version 0.5.6-1
       new  047674b   Merge tag 'debian/0.5.6-1' into debian/jessie-backports
       new  c8b1d29   releasing package fast5 version 0.5.6-1~bpo8+1

The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 .VERSION.in                         |    1 +
 .gitignore                          |    2 +
 .travis.Dockerfile.in               |   37 +
 .travis.yml                         |   19 +
 .version_files                      |    2 +
 LICENSE                             |   22 +
 README.md                           |   11 -
 README.org                          |   48 +
 VERSION                             |    1 +
 debian/changelog                    |   21 +
 debian/control                      |   11 +-
 debian/copyright                    |    7 +-
 debian/docs                         |    2 +-
 debian/examples                     |    2 -
 debian/patches/relative-paths.patch |    8 +-
 debian/patches/revise-example.patch |   31 -
 debian/patches/series               |    1 -
 debian/tests/control                |    6 -
 debian/watch                        |    5 +-
 python/.gitignore                   |    5 +
 python/Makefile                     |   35 +
 python/fast5/.version.py.in         |    1 +
 python/fast5/__init__.py            |   10 +
 python/fast5/source/fast5.cpp       |  182 ++++
 python/fast5/version.py             |    1 +
 python/setup.py                     |   94 ++
 src/.gitignore                      |    4 +
 src/Makefile                        |   35 +-
 src/a.cpp                           |   86 --
 src/f5-mod.cpp                      |   92 ++
 src/f5dump-full.cpp                 |  273 +++++
 src/f5dump.cpp                      |  197 ++++
 src/fast5.hpp                       |  928 ++++++++++++++---
 src/hdf5-mod.cpp                    |  308 ++++++
 src/hdf5_tools.hpp                  | 1894 +++++++++++++++++++++++++++--------
 src/tmp.cpp                         |  207 ++++
 36 files changed, 3883 insertions(+), 706 deletions(-)
 create mode 100644 .VERSION.in
 create mode 100644 .gitignore
 create mode 100644 .travis.Dockerfile.in
 create mode 100644 .travis.yml
 create mode 100644 .version_files
 create mode 100644 LICENSE
 delete mode 100644 README.md
 create mode 100644 README.org
 create mode 100644 VERSION
 delete mode 100644 debian/examples
 delete mode 100644 debian/patches/revise-example.patch
 delete mode 100644 debian/tests/control
 create mode 100644 python/.gitignore
 create mode 100755 python/Makefile
 create mode 100644 python/fast5/.version.py.in
 create mode 100755 python/fast5/__init__.py
 create mode 100644 python/fast5/source/fast5.cpp
 create mode 100644 python/fast5/version.py
 create mode 100755 python/setup.py
 create mode 100644 src/.gitignore
 delete mode 100644 src/a.cpp
 create mode 100644 src/f5-mod.cpp
 create mode 100644 src/f5dump-full.cpp
 create mode 100644 src/f5dump.cpp
 create mode 100644 src/hdf5-mod.cpp
 create mode 100644 src/tmp.cpp

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/fast5.git