[med-svn] [plink1.9] branch upstream updated (a42e1a4 -> fbbfac2)

[Dylan Aïssi]

This is an automated email from the git hooks/post-receive script.

bob.dybian-guest pushed a change to branch upstream
in repository plink1.9.

      from  a42e1a4   Imported Upstream version 1.90~b3.36-160416
       new  fbbfac2   Imported Upstream version 1.90~b3.40-160816

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 Makefile       |   2 +-
 pigz.c         |  12 ++-
 plink.c        | 248 ++++++++++++++++++++++++++++++++++++++++-----------------
 plink_assoc.c  |   2 +-
 plink_calc.c   |  41 ++++++----
 plink_cnv.h    |   2 -
 plink_common.c | 107 +++++++++++++++++++------
 plink_common.h |  77 ++++++++++--------
 plink_data.c   | 116 +++++++++++++++++++++------
 plink_dosage.c |   2 +-
 plink_glm.c    |  12 +--
 plink_help.c   | 124 +++++++++++++++--------------
 plink_lasso.c  |   2 +-
 plink_ld.c     | 155 ++++++++++++++++++++++++++----------
 plink_ld.h     |  34 ++++----
 plink_matrix.c |  14 +---
 plink_matrix.h |   7 ++
 plink_misc.c   |  15 ++--
 plink_set.c    |   2 +-
 19 files changed, 661 insertions(+), 313 deletions(-)

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/plink1.9.git