[med-svn] [gwama] 04/04: Update autopkgtest

[Dylan Aïssi]

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bob.dybian-guest pushed a commit to branch master
in repository gwama.

commit 715c586cafbd076d868e57484337156dbff203fe
Author: Dylan Aïssi <bob.dybian at gmail.com>
Date:   Fri Aug 26 08:00:25 2016 +0200

    Update autopkgtest
---
 debian/changelog                 | 1 +
 debian/tests/run-sample-analysis | 4 ++--
 2 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index 97d9658..5ddbafe 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -8,6 +8,7 @@ gwama (2.2.2+dfsg-1) UNRELEASED; urgency=medium
   * Update uscan options.
   * Update upstream website.
   * Drop d/p/02_Fix_license_issue.patch fixed upstream.
+  * Update autopkgtest to reflect some upstream changes.
 
  -- Dylan Aïssi <bob.dybian at gmail.com>  Mon, 22 Aug 2016 23:46:43 +0200
 
diff --git a/debian/tests/run-sample-analysis b/debian/tests/run-sample-analysis
index a0d2479..b6c854a 100644
--- a/debian/tests/run-sample-analysis
+++ b/debian/tests/run-sample-analysis
@@ -12,11 +12,11 @@ cd $ADTTMP
 cp -a /usr/share/doc/${pkg}/examples/samples/* $ADTTMP
 
 # Fixed analysis
-GWAMA --filelist "gwama.in" --quantitative --output "test_fixed" 
+GWAMA --filelist "gwama.in" --quantitative --output "test_fixed"  --name_marker "SNP" --name_ea "EFFECT_ALLELE" --name_nea "NON_EFFECT_ALLELE"
 diff test_fixed.out fixed.out
 
 # Random analysis
-GWAMA --filelist "gwama.in" --quantitative --output "test_random" --random
+GWAMA --filelist "gwama.in" --quantitative --output "test_random" --random  --name_marker "SNP" --name_ea "EFFECT_ALLELE" --name_nea "NON_EFFECT_ALLELE"
 diff test_random.out random.out
 
 rm -f $ADTTMP/*

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