[med-svn] [jellyfish] branch master updated (035e3b1 -> bef77d6)

[Andreas Tille]

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tille pushed a change to branch master
in repository jellyfish.

      from  035e3b1   Upload to unstable
       new  7784a23   Imported Upstream version 2.2.6
       new  3fe2778   Merge tag 'upstream/2.2.6'
       new  4183bfb   New upstream version
       new  f78384c   Update patches
       new  db2b6ff   Rename python bindings module name
       new  8ca24f0   run tests individually using pybuild (see https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=819016#25)
       new  de08e53   Fix package name
       new  e807692   Update changelog
       new  cca1a69   cme fix dpkg-control
       new  bef77d6   hardening=+all,-pie, upload to unstable

The 10 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 configure.ac                                       |   2 +-
 debian/changelog                                   |  11 ++
 debian/control                                     |   4 +-
 ...nable_c++11_error_deprecated-declarations.patch |  42 -------
 .../rename-python-module-to-dna_jellyfish.patch    | 139 +++++++++++++++++++++
 debian/patches/series                              |   2 +-
 debian/rules                                       |  16 +--
 include/jellyfish/rectangular_binary_matrix.hpp    |   5 +-
 jellyfish/merge_files.cc                           |   6 +-
 sub_commands/count_main.cc                         |   2 +-
 swig/Makefile.am                                   |   2 +-
 11 files changed, 171 insertions(+), 60 deletions(-)
 delete mode 100644 debian/patches/enable_c++11_error_deprecated-declarations.patch
 create mode 100644 debian/patches/rename-python-module-to-dna_jellyfish.patch

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