[med-svn] [prokka] 01/01: user generated files in /usr

[Andreas Tille]

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tille pushed a commit to branch master
in repository prokka.

commit adf860b5bf3a8131b40a7b432f5789444da7970a
Author: Andreas Tille <tille at debian.org>
Date:   Fri Dec 2 13:38:29 2016 +0100

    user generated files in /usr
---
 debian/README.Debian | 15 +++++++++++++++
 debian/changelog     |  1 +
 2 files changed, 16 insertions(+)

diff --git a/debian/README.Debian b/debian/README.Debian
index 35f4943..d5c5050 100644
--- a/debian/README.Debian
+++ b/debian/README.Debian
@@ -3,3 +3,18 @@ Prokka's databases are installed to /usr/share/prokka
 HAMAP.hmm is 224M, took 21 hours and 10 minutes, 15M of memory, single threaded?
 
 Shipped HAMAP.hmm is 88M ??
+
+
+After installing the package you need to run
+
+    prokka --setupdb
+
+as root.  This is creates files
+
+    /usr/share/prokka/db/kingdom/Archaea/sprot.{phr,pin,psq}
+
+which is not policy compliant.  It would be better to move the db to
+
+    /var/lib/prokka/db
+
+instead.
diff --git a/debian/changelog b/debian/changelog
index 16a9a67..548c1d7 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -4,5 +4,6 @@ prokka (1.11+dfsg-1) UNRELEASED; urgency=low
   Blocker for upload:
     There were questions about the database copyrights. I stopped work on it as
     my need for the package ceased. Others are welcome to finish it.
+  TODO: See README.Debian about user generated files in /usr
 
  -- Michael R. Crusoe <mcrusoe at msu.edu>  Thu, 12 Feb 2015 09:46:14 -0500

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