[med-svn] [python-pyvcf] branch upstream updated (ab7d885 -> de030e8)

Andreas Tille tille at debian.org
Fri Dec 2 20:16:17 UTC 2016


This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch upstream
in repository python-pyvcf.

      from  ab7d885   Imported Upstream version 0.6.7
       new  de030e8   New upstream version 0.6.8

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 PKG-INFO                     | 187 +------------
 README.rst                   |  33 ++-
 scripts/vcf_sample_filter.py |  39 +++
 setup.cfg                    |   2 +-
 setup.py                     |  40 +--
 vcf/__init__.py              | 175 +-----------
 vcf/cparse.pyx               |   5 +-
 vcf/model.py                 | 146 +++++++++--
 vcf/parser.py                | 193 ++++++++------
 vcf/sample_filter.py         | 115 ++++++++
 vcf/test/FT.vcf              |  50 ++++
 vcf/test/issue-214.vcf       |  32 +++
 vcf/test/strelka.vcf         |  57 ++++
 vcf/test/test_vcf.py         | 613 +++++++++++++++++++++++++++++++++++++++++--
 vcf/utils.py                 |   2 +-
 15 files changed, 1168 insertions(+), 521 deletions(-)
 create mode 100644 scripts/vcf_sample_filter.py
 create mode 100644 vcf/sample_filter.py
 create mode 100644 vcf/test/FT.vcf
 create mode 100644 vcf/test/issue-214.vcf
 create mode 100644 vcf/test/strelka.vcf

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/python-pyvcf.git



More information about the debian-med-commit mailing list