[med-svn] [htsjdk] branch master updated (fda2dfd -> 2ea9ded)

[Andreas Tille]

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tille pushed a change to branch master
in repository htsjdk.

      from  fda2dfd   Re-add the missing entry in changelog
       new  2ea9ded   Re-add file SAMFileReader.java featuring an outdated API which is used by Artemis and FastQC

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 debian/changelog                                 |   8 +
 debian/patches/add_lost_SAMFileReader.java.patch | 767 +++++++++++++++++++++++
 debian/patches/series                            |   1 +
 3 files changed, 776 insertions(+)
 create mode 100644 debian/patches/add_lost_SAMFileReader.java.patch

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