[med-svn] [cwltool] branch master updated (aa7208f -> 70cecb4)

[Michael Crusoe]

This is an automated email from the git hooks/post-receive script.

misterc-guest pushed a change to branch master
in repository cwltool.

      from  aa7208f   version update
      adds  c36e784   Imported Upstream version 1.0.20160209222805
       new  5964045   Imported Upstream version 1.0.20160316204054
       new  34eb81f   Merge tag 'upstream/1.0.20160316204054'
       new  381c89f   match changelog to version in archive; doc new release
       new  57e9b8a   Imported Upstream version 1.0.20160504183010
       new  70cecb4   new upstream release

The 5 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 MANIFEST.in                           |   1 +
 PKG-INFO                              |   7 +-
 README.rst                            |   5 +
 cwltool.egg-info/PKG-INFO             |   7 +-
 cwltool.egg-info/SOURCES.txt          |   7 +-
 cwltool.egg-info/requires.txt         |   5 +-
 cwltool/__main__.py                   |   2 +-
 cwltool/aslist.py                     |   5 -
 cwltool/builder.py                    |  74 +++++--
 cwltool/cwlrdf.py                     | 163 +++++++++++++---
 cwltool/cwltest.py                    |  96 ++++++---
 cwltool/docker.py                     |  17 +-
 cwltool/docker_uid.py                 |  23 +--
 cwltool/draft2tool.py                 | 305 +++++++++++++++++++++--------
 cwltool/expression.py                 |  65 +++---
 cwltool/factory.py                    |  13 +-
 cwltool/flatten.py                    |   7 +-
 cwltool/job.py                        | 119 +++++++----
 cwltool/main.py                       | 358 +++++++++++++++++++++-------------
 cwltool/pathmapper.py                 |  62 ++++--
 cwltool/process.py                    | 247 ++++++++++++++++-------
 cwltool/sandboxjs.py                  |  92 ++++++---
 cwltool/schemas/draft-3/Process.yml   |   1 +
 cwltool/schemas/draft-3/contrib.md    |   3 +
 cwltool/schemas/draft-3/invocation.md |  10 +-
 cwltool/stdfsaccess.py                |  22 +++
 cwltool/update.py                     |  98 +++++++---
 cwltool/utils.py                      |  18 ++
 cwltool/workflow.py                   | 204 ++++++++++++-------
 debian/changelog                      |  10 +-
 debian/control                        |   4 +-
 debian/patches/no-typing              |  19 ++
 debian/patches/series                 |   2 +-
 debian/patches/use-older-rdflib       |  13 --
 debian/rules                          |   5 +
 ez_setup.py                           | 332 +++++++++++++++++++++++++++++++
 gittaggers.py                         |  26 +++
 setup.cfg                             |   5 +-
 setup.py                              |   7 +-
 39 files changed, 1831 insertions(+), 628 deletions(-)
 create mode 100644 MANIFEST.in
 delete mode 100644 cwltool/aslist.py
 create mode 100644 cwltool/stdfsaccess.py
 create mode 100644 cwltool/utils.py
 create mode 100644 debian/patches/no-typing
 delete mode 100644 debian/patches/use-older-rdflib
 create mode 100644 ez_setup.py
 create mode 100644 gittaggers.py

-- 
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