[med-svn] [falcon] 03/04: Merge tag 'upstream/1.8.5'

[Afif Elghraoui]

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afif pushed a commit to branch master
in repository falcon.

commit c1b1f7b7da49de03cc44b619818c031fecd2b8f5
Merge: 0399ea8 d74e7a3
Author: Afif Elghraoui <afif at debian.org>
Date:   Sun Dec 11 14:35:19 2016 -0800

    Merge tag 'upstream/1.8.5'
    
    Upstream version 1.8.5

 FALCON-make/makefile                        |  2 +
 FALCON/falcon_kit/bash.py                   |  7 ++-
 FALCON/falcon_kit/mains/get_read_ctg_map.py | 56 +++--------------
 FALCON/falcon_kit/mains/run1.py             |  8 ++-
 FALCON/falcon_kit/pype_tasks.py             | 69 +++++++++++++++-----
 FALCON/falcon_kit/run_support.py            |  8 ++-
 FALCON_unzip/falcon_unzip/phasing.py        |  1 +
 pypeFLOW/pwatcher/network_based.py          |  2 +-
 pypeFLOW/pypeflow/do_task.py                | 81 +++++++++++++++++-------
 pypeFLOW/pypeflow/simple_pwatcher_bridge.py | 97 ++++++++++++++++++-----------
 10 files changed, 202 insertions(+), 129 deletions(-)

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