[med-svn] [python-biom-format] 01/04: Add random seed to test that fails under some circumstances

Andreas Tille tille at debian.org
Tue Dec 20 07:27:40 UTC 2016


This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository python-biom-format.

commit ab17589db65117b05b3af5587fa970ff228bfdf4
Author: Andreas Tille <tille at debian.org>
Date:   Mon Dec 19 22:27:40 2016 +0100

    Add random seed to test that fails under some circumstances
---
 debian/changelog                          |  7 +++++++
 debian/patches/random_seed_for_test.patch | 15 +++++++++++++++
 debian/patches/series                     |  1 +
 3 files changed, 23 insertions(+)

diff --git a/debian/changelog b/debian/changelog
index 6c0f3a7..8ed806e 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+python-biom-format (2.1.5+dfsg-6) UNRELEASED; urgency=medium
+
+  * Add random seed to test that fails under some circumstances
+    Closes: #848410
+
+ -- Andreas Tille <tille at debian.org>  Mon, 19 Dec 2016 22:25:56 +0100
+
 python-biom-format (2.1.5+dfsg-5) unstable; urgency=medium
 
   * Restrict set of architectures also for biom-format-tools to make sure
diff --git a/debian/patches/random_seed_for_test.patch b/debian/patches/random_seed_for_test.patch
new file mode 100644
index 0000000..0c1aa14
--- /dev/null
+++ b/debian/patches/random_seed_for_test.patch
@@ -0,0 +1,15 @@
+Description: Add random seed to test that fails under some circumstances
+Bug-Debian: 848410
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Mon, 19 Dec 2016 22:25:56 +0100
+
+--- a/tests/test_util.py
++++ b/tests/test_util.py
+@@ -46,6 +46,7 @@ class UtilTests(TestCase):
+         self.biom_otu_table1_w_tax = parse_biom_table(biom_otu_table1_w_tax)
+ 
+     def test_generate_subsamples(self):
++        np.random.seed(123)
+         table = Table(np.array([[3, 1, 1], [0, 3, 3]]), ['O1', 'O2'],
+                       ['S1', 'S2', 'S3'])
+         actual_o1 = set()
diff --git a/debian/patches/series b/debian/patches/series
index 06593cf..13985b1 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -2,3 +2,4 @@ ignore_local_dist-packages.patch
 no-web-adds.patch
 fix_future_import.patch
 enable_sloppy_sphinx_build.patch
+random_seed_for_test.patch

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/python-biom-format.git



More information about the debian-med-commit mailing list