[med-svn] [libbio-graphics-perl] branch upstream updated (46bbf18 -> 9eaceee)

[Andreas Tille]

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tille pushed a change to branch upstream
in repository libbio-graphics-perl.

      from  46bbf18   Imported Upstream version 2.39
       new  9eaceee   New upstream version 2.40

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 Build.PL                               |  10 +-
 Changes                                |   4 +
 MANIFEST                               |   9 +-
 META.json                              |  11 +-
 META.yml                               | 137 ++-------
 Makefile.PL                            |   2 +-
 README                                 |   1 +
 lib/Bio/Graphics.pm                    |   3 +-
 lib/Bio/Graphics/Glyph/gene.pm         |  20 +-
 lib/Bio/Graphics/Glyph/rainbow_gene.pm |   4 +-
 lib/Bio/Graphics/Glyph/segments.pm     |  33 +--
 lib/Bio/Graphics/Glyph/topoview.pm     | 496 +++++++++++++++++++++++++++++++++
 scripts/bam_coverage_windows.pl        | 131 +++++++++
 scripts/coverage_to_topoview.pl        | 247 ++++++++++++++++
 14 files changed, 940 insertions(+), 168 deletions(-)
 create mode 100755 lib/Bio/Graphics/Glyph/topoview.pm
 create mode 100755 scripts/bam_coverage_windows.pl
 create mode 100755 scripts/coverage_to_topoview.pl

-- 
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